Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02684 ATGGAAGCTAAGAGTGGTCTTTTTGCAGGGTCTCTTAACAGCAATGAACTTGTGGTCATCCAAAAACAAAATGAGCCTAAGGCAGTGAAAAACTTGGATGGTCAAGACTGTGAGATATGTGGTGATTCTGTAGGGCGTACAGTAGAAGGAGACTTATTTGTAGCTTGTGAAGAGTGTGGCTTCCCTGTTTGCAGGCCATGCTATGAGTATGAAAGGAAAGAAGGCTCTCAAAATTGCCCTCAATGCCATACAAGATACAAGCGTATCAAAGGAAGTCCAAGAGTGGAGGGAGATGAAGATGAAGAAGATGTGGATGATATTGAACAAGAATTTAAAATGGAAGAGGAAAAGTACAAGCTTATGCATGAAGATAATATGAATAGCATTGATGATGATGATACAAAATATAGGGAGCAACCCCTATATTCTCACAGTATTGGAGAAAATTATGGTGCAAAATTAGATAACAAGGAGAAAACAGATGAGTGGAAGCAGCAAGGGAATCTGTTGATCGAAACTGACGCGGTTGATCCAGAAAAGGCCATGAAAGATGAAACTAGACAGCCACTATCAAGGAAAGTAGCAATACCTTCAGGAAGACTCAGTCCTTATAGAATGATGGTTGTGGCTAGGCTAATCCTTCTATTACTCTTCTTTGAGTACAGAATCTTCCATCCAGTACCTGATGCAATTGGACTTTGGTTCATATCAGTATCATGTGAAATCTGGCTTGCATTGTCATGGATAGTTGATCAGATTCCCAAATGGTTTCCCATCGATCGCGAGACATACCTTGACCGCCTTTCAGTCAGGTTTGAGCCGGAAAACAAGCCTAATATGCTTTCTCCAATAGATATCTTTATAACAACCGCAGATCCAATCAAGGAACCACCTCTTGTTACAGCAAATACTGTTCTTTCAATTTTGGCACTAGATTATCCTGCACACAAAATTTCATGTTACGTTTCTGATGACGGTGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACAGCTGAATTCGCGCAAAAATGGGTACCTTTCTGTAAACAATTCTCTACAGAGCCGCGAGCACCTGAGAAGTATTTCTCTGAGAAGATAGACTTTCTTAAGGATAAGCTCCAACCCACATACGTAAAAGAACGCCGTGCCATGAAGAGAGAATATGAAGAGTTTAAGGTGAGAATAAATGCGCTTGTGGCTAAATCTATGAGAGTTCCATCAGAAGGTTGGAGTATGAAAGATGAAACACCATGGCCAGGAAACAATACAAAAGATCATCCAAGTATGATACAAATACTTCTTGGTCACAATGGAGGAGACAGTGAAGGAAATGAACTTCCATCTCTTGTCTATATTTCTAGAGAAAAAAGACCTGCATTTCAACATCACACAAAAGCCGGTGCAATGAACGCCTTGCTTCGCGTATCGGCAGTATTGAGCAATGCCCCTTTTGTGCTCAACTTGGACTGCAATCATTATGTGAATTACAGCAAAGTTGTGAGAGAAGCCATGTGTTTCTTTATGGACATTCAACTTGGAAATAGTATTGCCTTTGTTCAGTTTCCACTAAGATTTGATAGTCTTGATAGGAATGATCGTTATGCCAACAAAAACACTATTTTATTTGATATCAACTTGAGGTGTCTAGATGGAATTCAAGGACCTGTTTATATTGGATCAGGTTGTATATTCAGAAGGAAAGCTTTAAATGGCTTTGATCCTCCTAAGGCGTCAAAACGCTCTCGAGTCGTACAAGTTCACTCAAAACAGGATGAAAATGAAGAGGATGGGAGCATTATAGAAGCAACCGATGAAGAGAAGCAGCCGTTGCAATTAGATAAGGATACTGAAAATAAATTTGGAAAGTCTACACTCTTCATGAATTCTTCATTGACAGAAGAAGGTGGTGTAGATCCTTCTTCAACTCAAGAAGTCCTGCTTAAAGAGGCCATTCATGTCATGAGTTGTAGCTACGAGGACCGGACACTGTGGGGATACGAGGTTGGTATGAGCTATGGATCTATAGCATCAGATATTCTAACAAGTTTAAAGATGCATACTCGTGGTTGGAGATCGGTATACTGCATGCCGAAAAGAGCTCCTTTTAGGGGAACAGCCCCGATCAATCTTACAGAAAGACTTAACCAAGTTCTTAGATGGGCAGTAGGATCACTTGAGATCCTATTCAGCCGCCACTGTCCAATATGGTATGGTTTTAAAGAAGGAAGACTCAAGCTGCTCCAAAGGATTGCCTATATTAACAGCACTGTCTACCCTTTTAGTGCATTACCTCTCATAATATATTGTATCGTTCCGGCTGTCTGCTTGCTCACTGATAAATTCATCACACCATCGGTAGGAACTTTTGCAAGTCTGGTATTCATTTCTCTATTCATCTCAATCTTCGCCTCTTCTATTCTTGAATTGAGATGGAGTGGAGTTAGTCTTGAGGAATGGTGGAGAAATCAACAATTTTGGGTCATTGGAAGTATATCAGCACATCTCTTTGCAATTGTACAAGGCCTAATGGGAAGATTCCTTGGTAGATTTAATGCACATTTCAACATTGTATCGAAGGCACCAGACGATGATGGCGAGTTTAACGAACTGTACACAATTAGATGGACAGTACTACTGATACCTCCAACCACAGTGACTATATTCAACATTATTGGTATTGTTGCTGGTTTCACAGATGCTATAAATAGTGGTGAACATGAATGGGGAGCATTGATTGGGAAACTGTTCTTTTCTTCATGGGTTATTGCTCATCTTTATCCTTTCCTTAAAGGACTAATGGGAAGACAGAATAGAACACCAACTCTTGTTGTCATTTGGTCTGTGCTTTTGGCTTCTATATTTTCTTTGGTTTGGGTAAGAATTGACCCTTTTGTGTTGAAAACTAAGGGACCTGATGTTAAGCAATGTGGAATTAGTTGTTGA 2946 0.4012 MEAKSGLFAGSLNSNELVVIQKQNEPKAVKNLDGQDCEICGDSVGRTVEGDLFVACEECGFPVCRPCYEYERKEGSQNCPQCHTRYKRIKGSPRVEGDEDEEDVDDIEQEFKMEEEKYKLMHEDNMNSIDDDDTKYREQPLYSHSIGENYGAKLDNKEKTDEWKQQGNLLIETDAVDPEKAMKDETRQPLSRKVAIPSGRLSPYRMMVVARLILLLLFFEYRIFHPVPDAIGLWFISVSCEIWLALSWIVDQIPKWFPIDRETYLDRLSVRFEPENKPNMLSPIDIFITTADPIKEPPLVTANTVLSILALDYPAHKISCYVSDDGASMLTFEALQETAEFAQKWVPFCKQFSTEPRAPEKYFSEKIDFLKDKLQPTYVKERRAMKREYEEFKVRINALVAKSMRVPSEGWSMKDETPWPGNNTKDHPSMIQILLGHNGGDSEGNELPSLVYISREKRPAFQHHTKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNYSKVVREAMCFFMDIQLGNSIAFVQFPLRFDSLDRNDRYANKNTILFDINLRCLDGIQGPVYIGSGCIFRRKALNGFDPPKASKRSRVVQVHSKQDENEEDGSIIEATDEEKQPLQLDKDTENKFGKSTLFMNSSLTEEGGVDPSSTQEVLLKEAIHVMSCSYEDRTLWGYEVGMSYGSIASDILTSLKMHTRGWRSVYCMPKRAPFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKLLQRIAYINSTVYPFSALPLIIYCIVPAVCLLTDKFITPSVGTFASLVFISLFISIFASSILELRWSGVSLEEWWRNQQFWVIGSISAHLFAIVQGLMGRFLGRFNAHFNIVSKAPDDDGEFNELYTIRWTVLLIPPTTVTIFNIIGIVAGFTDAINSGEHEWGALIGKLFFSSWVIAHLYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02684 981 MobiDBLite consensus disorder prediction 577 606 - -
Mepo1g02684 981 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Mepo1g02684 981 CDD mRING-HC-C4C4_CesA 35 85 - -
Mepo1g02684 981 SUPERFAMILY Nucleotide-diphospho-sugar transferases 297 774 IPR029044 -
Mepo1g02684 981 Coils Coil 382 402 - -
Mepo1g02684 981 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 273 375 IPR029044 -
Mepo1g02684 981 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 426 575 IPR029044 -
Mepo1g02684 981 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 186 948 - -
Mepo1g02684 981 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Mepo1g02684 981 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Mepo1g02684 981 Pfam Cellulose synthase 284 975 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mepo1g02684 981 SUPERFAMILY RING/U-box 22 105 - -
Mepo1g02684 981 MobiDBLite consensus disorder prediction 585 606 - -
Mepo1g02684 981 Coils Coil 97 124 - -
Mepo1g02684 981 FunFam Cellulose synthase 19 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02684 Mepo-Chr1 28458324 28464710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02684 1 981 Cell Wall Biosynthesis AT5G17420 63.981 0.0 1357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02684 K10999 - gmx:100777270 1595.87