Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02675 ATGGATGAAGTGGGTAGCAGCTGTGAGTGGAGCAGAGATCAAGATAAAGCATTTGAAAATGCATTGGTGAATTATCGCGAGGATGCTGTGGATCGATGGGAGAAAATCGCGGCTGATGTACCCGGGAAAACTTTAGAAGAGATTAAACGTCACTATGTGGTTTTGTTTGATGATATCAACCACATTGAGACTGGTTTTGTGCCTCTGCCAGATTATGATCCTTTTTCAAAGAGCTCAACAAAGTGTACTGGTGAAGGAGGAGCTGTGAAAAAGGGAACTAAGGCTTCGAGTTCTTATCAAGAACGGCGAAAGGGTGTTCCTTGGACAGAAGATGAACATAGGCTATTTCTTCAAGGCTTGGAGAACCATGGATGGGGTGACTGGCGAAGTATATCAAGGTACAGTGTGGTGACAAGAACACCTACACAAGTAGCAAGCCATGCTCAGAAATACAAAATTCGTCAGGATTCAATGAAAGAGAAGAAAGAAAGAAGGCGATCCAGCATACATGATGTCACCTTTGTCAAAAATGGAGACATTTCAGCACCTCAAGGACCAATTACTGGTCAAGCAAGCAATTCTGCTGCAAGTTCTGCTGGACAATCAGCCGAACAAGCTCCTCCAGTCCCACCTGCTGGAATCAAAACTCTTGATAATCCTCCAGCCCCACCTGCTGGAATACACGCTGCTCCTAGGATCGGGCAACCTATAGGAGGACCAATTGTATCTGCAGTTGGTACTCCAGTGGATTTTACTGCTCCCGGAGACATGGATTATGGTCTTGGACCAGTTTCTGAGACAGTTATGCCAGGGGTACCAATGAACCTGGGTCCAATGACATATGCCATGCAACATACATATGCTCAATCATGA 873 0.4525 MDEVGSSCEWSRDQDKAFENALVNYREDAVDRWEKIAADVPGKTLEEIKRHYVVLFDDINHIETGFVPLPDYDPFSKSSTKCTGEGGAVKKGTKASSSYQERRKGVPWTEDEHRLFLQGLENHGWGDWRSISRYSVVTRTPTQVASHAQKYKIRQDSMKEKKERRRSSIHDVTFVKNGDISAPQGPITGQASNSAASSAGQSAEQAPPVPPAGIKTLDNPPAPPAGIHAAPRIGQPIGGPIVSAVGTPVDFTAPGDMDYGLGPVSETVMPGVPMNLGPMTYAMQHTYAQS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02675 290 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Mepo1g02675 290 CDD SANT 9 52 IPR001005 -
Mepo1g02675 290 FunFam Transcription factor SRM1 2 69 - -
Mepo1g02675 290 MobiDBLite consensus disorder prediction 152 172 - -
Mepo1g02675 290 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 155 IPR006447 GO:0003677
Mepo1g02675 290 Gene3D - 8 54 - -
Mepo1g02675 290 MobiDBLite consensus disorder prediction 80 105 - -
Mepo1g02675 290 SMART sant 6 58 IPR001005 -
Mepo1g02675 290 SMART sant 104 154 IPR001005 -
Mepo1g02675 290 Gene3D - 106 158 - -
Mepo1g02675 290 CDD SANT 107 152 IPR001005 -
Mepo1g02675 290 ProSiteProfiles Myb-like domain profile. 10 56 IPR001005 -
Mepo1g02675 290 PANTHER TRANSCRIPTION FACTOR KUA1 6 281 - -
Mepo1g02675 290 FunFam transcription factor MYB1R1 106 157 - -
Mepo1g02675 290 SUPERFAMILY Homeodomain-like 100 157 IPR009057 -
Mepo1g02675 290 ProSiteProfiles SANT domain profile. 108 156 IPR017884 -
Mepo1g02675 290 MobiDBLite consensus disorder prediction 147 224 - -
Mepo1g02675 290 Pfam Myb-like DNA-binding domain 107 152 IPR001005 -
Mepo1g02675 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 156 IPR017930 -
Mepo1g02675 290 MobiDBLite consensus disorder prediction 183 204 - -
Mepo1g02675 290 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02675 Mepo-Chr1 28352322 28355823 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo1g02675 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02675 - - gmx:100819797 349.362