Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02672 ATGGCATCACCATCTCAAAACTTTGCATCCAAGTTAACAGCACTTGTTGTGGATGATGATGCAATGACCCGAAGAATTCATCAAATGACGTTGAGTAACTTAGGAGTTAACAACACTTGTGTGAAAAACGGAAAAGAAGCGGTGGAAATTCATCAGCATGGTCAAAAATTTGACCTAATCCTGATGGATAAGGATATGCCTGAGATGAATGGAACTGAGGCAACAAAGCAACTACGCTTGATGGGGATATCTAGCACTATTGTTGGTGTATCCTCACACTCTATGGAAGAGGAGGAAATAGTGGTAAAATTTATGGAAGCAGGACTCGATGAATATCTAGAGAAACCATTGGATAAGGCAAAACTCAATTCCATTCTTCATGCCGTTGAAAAAATAAAAGAAAAAGAAAATTCCATTCCTCACAAGATGGAATGA 435 0.3862 MASPSQNFASKLTALVVDDDAMTRRIHQMTLSNLGVNNTCVKNGKEAVEIHQHGQKFDLILMDKDMPEMNGTEATKQLRLMGISSTIVGVSSHSMEEEEIVVKFMEAGLDEYLEKPLDKAKLNSILHAVEKIKEKENSIPHKME 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02672 144 SMART REC_2 12 126 IPR001789 GO:0000160
Mepo1g02672 144 SUPERFAMILY CheY-like 10 135 IPR011006 -
Mepo1g02672 144 ProSiteProfiles Response regulatory domain profile. 13 130 IPR001789 GO:0000160
Mepo1g02672 144 Pfam Response regulator receiver domain 15 125 IPR001789 GO:0000160
Mepo1g02672 144 Gene3D - 1 141 - -
Mepo1g02672 144 CDD REC_hyHK_CKI1_RcsC-like 15 126 - -
Mepo1g02672 144 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02672 Mepo-Chr1 28323887 28324704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02672 12 126 Response Regulator Gene Family AT3G04280 50.000 1.13e-32 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo1g02672 Response_reg 1.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02672 - - rcu:8262779 154.066