Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02671 ATGGCTATACCAAAATTGGGACCGGGGTTTCGATTCTCTCCAACTGGAGTTGAATTGATCAAATATTTCCTCAAAAGGAAAGTCATGGGGAAAAAGTTTCATAACGATGTCATTGCTGAACTTGACATATACAAATACGCACCTTGGGATCTCCCAGATTTGTCTTATCTCCAGAATGGGGATTTGGAATGGTATTTCTTCTGTCCGATAGAGAAGAAGTATGGAAGTGGGTCGAGGATGAATCGGGCTACGGAAATAGGGTTTTGGAAAGCTACCGGTAAGGATAGAGCTGTTCAACAGAATAATCAAACTGTGGGGATGATTAAAACACTGATATTTCATACTGGAAAAGCACCTCGCGGGGATCGTACTGATTGGGTTATGCACGAGTATAGGCTTGAAGATAAGGACCTAACTGATAAAGGAATTGTTCAGGATTCCTATGTAATATGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGGAGACCATTTAATGAGGAAGACTGGAGTGACGATGAAGTAGGAATACCGTTTGCTGAGCCGGCTGTACTAGCTCCCACTTTGCCTGTGACATCTAATAGTTTTGTTCTAAATGACCAGAATCTCCATGCTATTGGATATAATGGTTCAATATCCATGCCATGTCAATCTGGATTGGTGCCTTCTCCCGATCCAGCAAATTCATGTCAAACAGGATTACCGCCTTCTCCCTACCCTGCAAATTCATGTCAAATAGGATTGACGCCTTCTCCAGACCCTGTGAATTCCTGTCAAACAGGATTTATGCTATCTCCCGACTCTGCAAATGCATGTCACATAGGATTTATGCCGTCTCCCGACCCTTCAAATTCATGCCAAACAGGGTATATGCCGTCTCCTGATCCTGCAAATGAATGTCAAATAGGATTTATGTCTCCCGACCCTGCAAATTCACATCAAACAGGATTGGTGCTGTCTCCCCCCAACCCTGCAAATTCATGTAAAACAAGATTGGTGCCTTCTCCCGACCCTGTGGATAATTCATATCATCAAGCTGTTAATAATGATGACATTTTATCAATGCTTGCTATGTTCGACGACGACATATTGCCTGAGGAAAACAATGCTGAAGGTGCACTATCAACTGACTTTTTTGATGGTTTGGGAGACCTGGATTGCTTGGGACCTGTTGGCCAGAATGCTGACTTTAGCACATACGGAATGTCTTTTACGGGTGATGACGACTTGGACTTCATGGAGTTGATTGATCTAGACTCTGAGATGTTCTGGCAGAGTGCTGCTGAACCAAAGTTGGACCCAAAATAA 1326 0.4321 MAIPKLGPGFRFSPTGVELIKYFLKRKVMGKKFHNDVIAELDIYKYAPWDLPDLSYLQNGDLEWYFFCPIEKKYGSGSRMNRATEIGFWKATGKDRAVQQNNQTVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLTDKGIVQDSYVICKVFQKEGPGPRNGAQYGRPFNEEDWSDDEVGIPFAEPAVLAPTLPVTSNSFVLNDQNLHAIGYNGSISMPCQSGLVPSPDPANSCQTGLPPSPYPANSCQIGLTPSPDPVNSCQTGFMLSPDSANACHIGFMPSPDPSNSCQTGYMPSPDPANECQIGFMSPDPANSHQTGLVLSPPNPANSCKTRLVPSPDPVDNSYHQAVNNDDILSMLAMFDDDILPEENNAEGALSTDFFDGLGDLDCLGPVGQNADFSTYGMSFTGDDDLDFMELIDLDSEMFWQSAAEPKLDPK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02671 441 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Mepo1g02671 441 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 205 - -
Mepo1g02671 441 FunFam Nac domain-containing protein 86 15 159 - -
Mepo1g02671 441 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Mepo1g02671 441 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Mepo1g02671 441 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02671 Mepo-Chr1 28310247 28313408 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02671 1 263 NAC Transcription Factor Family AT5G09330 51.311 8.00e-89 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g02671 NAM 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02671 - - mtr:11427573 675.241