Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02661 ATGCAAATATCGGAGAAGGAAGATGAGGAGAGTGAGAAGGAGAGAATATTTGAAGCAATGACCGATATGTTCGACGTTCATGCACAATTCGACGGTGGAGAACCTCAGAGGTTGAAGGTTCGACACCTTGATGTCACGTTAAGAGGTATCAAGGATCCACTGAATGAATTCAACCAAGGAGTCAACCCCAGAGACACAGGAAGGATGGAATACGTTCGATATCTCATGAGAAAAAGATCTTCTTTATCAAATTCTCAATCCAATAATAACTACCCTCAAGTGTCTGAACCTGATCCTTATCAAAGACAATTGCAACAACTCTTCAATCTTCATGATTCAGGTTTAGATCAAGCTTTCATTGATGCTTTACCAGTTTTCCTTTACAAAGAGATAATAGGTTTGAAGGAACCATTTGATTGTGCTGTTTGTCTTTGTCAATTCACAGAACAAGACATGTTGAGATTGTTGCCTCTTTGTAATCATGCTTTTCATATCGATTGTATCGATACCTGGCTTCTTTCGAATTCAACTTGTCCTCTTTGTAGAGGGAGTCTTTATGAACATGGATTTGCCTTTGAAAATCCTGTTTATGATTTTGAGAGTTTAAGGGAAGAAGATAGGGTTTTTGATAGTGTTGTTGGTGATGCTGCTTCTGTTAACAAGCATGCAGAAAATCATATAATGAGTGGGAAAAGGGTTTTTTCTGTTAGGCTTGGAAAATTTAGAAGCTCAAATAATGGAGAGGGGGGTGTGGAAAGAAATGAAGGAGAATGTAGTAGTACAACTAAAAGTATTGTTGATGATGTAAGGAGATGCTATTCAATGGGTTCTTACCAATATGTTGTTGCTGATTCAGATTTGGTAGTGGCTTTGTGTCCTAATAGAGGTGAGGGAGGAGGAAATAGTGCTAGTATGAGACGATTGAAAGGAGGGTTTGGTCAAAATGGGAATTGTTCCATTGATGGTGGAGATGTTGAGGGGAAAAAAATCAATGTTGCTAGGAAAGGTGAAAGTTTTTCTATATCAAAGATTTGGCTTTGGTCTAGGAAGGATAAGGTATCAAGTTCATCACAATCTCATATGTTTAATTCTAATGTCGCTTCAACTTTGCCATGGATGAATAGAGAAATGAAGGAAGCAACTTAG 1146 0.3805 MQISEKEDEESEKERIFEAMTDMFDVHAQFDGGEPQRLKVRHLDVTLRGIKDPLNEFNQGVNPRDTGRMEYVRYLMRKRSSLSNSQSNNNYPQVSEPDPYQRQLQQLFNLHDSGLDQAFIDALPVFLYKEIIGLKEPFDCAVCLCQFTEQDMLRLLPLCNHAFHIDCIDTWLLSNSTCPLCRGSLYEHGFAFENPVYDFESLREEDRVFDSVVGDAASVNKHAENHIMSGKRVFSVRLGKFRSSNNGEGGVERNEGECSSTTKSIVDDVRRCYSMGSYQYVVADSDLVVALCPNRGEGGGNSASMRRLKGGFGQNGNCSIDGGDVEGKKINVARKGESFSISKIWLWSRKDKVSSSSQSHMFNSNVASTLPWMNREMKEAT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02661 381 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Mepo1g02661 381 FunFam RING-H2 finger protein ATL46 102 187 - -
Mepo1g02661 381 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 189 IPR013083 -
Mepo1g02661 381 Pfam Ring finger domain 139 182 IPR001841 -
Mepo1g02661 381 CDD RING-H2_EL5-like 139 182 - -
Mepo1g02661 381 SMART ring_2 140 181 IPR001841 -
Mepo1g02661 381 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 71 345 - -
Mepo1g02661 381 SUPERFAMILY RING/U-box 119 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02661 Mepo-Chr1 28207439 28212349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02661 101 357 C3H Transcription Factor Family AT2G18650 40.636 2.87e-54 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02661 - - gmx:100818135 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02661 1 28207439 28212349 Mepo1g02661 1 28207439 28212349 ECH