Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02652 ATGAAAATAATGGATGAAGTGGGTAGTGAGTGGAGCAACGAGCAGAATAATTTGTTTGAATATGCATTGGTGAATTATCCTGACGATGTTGTGGATCGATGGGAGAAGATTGCGGCTGATGTGCCTGGGAAAACTTTGGAAGAAATTAAACATCACTACGAGATTTTGGTATATGATATCCACAACATTGAATATGGTTTTGTGCCTCTGCCAGATTATGATTCTTTTTCAAAGACCTCAAACTCAACAAAGCGTGCTATTGTCAAAAGGGAACTAAGGCTTCAGGTTTTTATCATTGGACAGAAGATGAACACAAGTTTGTTTAATTTTGTTTTGCTTTGGTAA 345 0.371 MKIMDEVGSEWSNEQNNLFEYALVNYPDDVVDRWEKIAADVPGKTLEEIKHHYEILVYDIHNIEYGFVPLPDYDSFSKTSNSTKRAIVKRELRLQVFIIGQKMNTSLFNFVLLW 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02652 114 Gene3D - 8 58 - -
Mepo1g02652 114 FunFam Transcription factor SRM1 3 70 - -
Mepo1g02652 114 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 9 82 IPR044636 GO:0003700
Mepo1g02652 114 SMART sant 7 59 IPR001005 -
Mepo1g02652 114 Pfam Myb-like DNA-binding domain 10 53 IPR001005 -
Mepo1g02652 114 CDD SANT 10 53 IPR001005 -
Mepo1g02652 114 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Mepo1g02652 114 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02652 Mepo-Chr1 28058368 28058712 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo1g02652 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02652 - - mtr:25501293 148.288