Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02627 ATGTCACTCTCCACCACAACTTCCCACTTCACCATTCTTCCTTCACTTCCTTCAACTTCACCACTTTCTCTCAGATTTTCCTTCACTTTCCAACCAAATAGAAACCACAAAACTTGTCTCAAAACTCTCTTGTCTTCTTCATCAAGGCATGCTAGATTCTTGGTGAAGTCTCAATCTACTACTGCTTCATCTGAGGCTGTGAAAGTGACACAAGTGCCTTCTGAAATGAAGGCTTGGGTGTATGGAGAATATGGAGGTGTCGATGTGTTGAAATTTGACTCCAATGTTGCTGTACCTGATGTTAAGGCAGATCAAGTTCTTGTTAAAGTTGTTGCTGCTGCTCTTAACCCTGTTGATGGTAAAAGAAGGCAAGGAAAATTTAAGGCTACGGATTCTCCTCTTCCGACTGTTCCTGGCTATGATGTTGCTGGGATTGTAGTGAAGGTTGGGAGTGAAGTAAAGGACTTCAAAGTGGGTGATGAAGTGTATGGTGATGTAAATGAGAAAGCATTAGAAGGGCCTAACCAATTTGGGTCTTTGGCTGAGTACACAGCTGTTGAGGAGAAATTGTTGGCACTAAAACCTACAAATTTGGACTTTGCTCAAGCTGCTTCTCTTCCTCTTGCTATTGAGACTGCTTATGAAGGTTTGGAGAGGACTGGATTTTCTTCTGGTAAATCTATTCTTGTTCTCAATGGTTCTGGTGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAACAAGTTTTTGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGACATTTGGAGCTACTGAAAAGTCTTGGAGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGACTTGCCAGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGTGACAGAGCAGTGAAGGCAATAAAAGAAGGTGGCAGTGTAGTAGCACTGACAGGAGCTGTTACACCACCTGGATTCAGATTTGTAGTGACTTCCAATGGAGCTGTTTTGAAGAAACTAAACCCTTATTTAGAGAGTGGAAAGGTGAAGCCAATTATAGATCCCAAAGGTCCATTCCCTTTTGCTCAGGTTGCTGAAGCTTTCTCTTACATTGAAACAAACAAAGCTACTGGAAAGGTTGTTATATTCCCCATCCCATGA 1155 0.419 MSLSTTTSHFTILPSLPSTSPLSLRFSFTFQPNRNHKTCLKTLLSSSSRHARFLVKSQSTTASSEAVKVTQVPSEMKAWVYGEYGGVDVLKFDSNVAVPDVKADQVLVKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGIVVKVGSEVKDFKVGDEVYGDVNEKALEGPNQFGSLAEYTAVEEKLLALKPTNLDFAQAASLPLAIETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRHLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVALTGAVTPPGFRFVVTSNGAVLKKLNPYLESGKVKPIIDPKGPFPFAQVAEAFSYIETNKATGKVVIFPIP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02627 384 SMART PKS_ER_names_mod 85 380 IPR020843 GO:0016491
Mepo1g02627 384 SUPERFAMILY GroES-like 73 230 IPR011032 -
Mepo1g02627 384 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 225 246 IPR002364 GO:0008270|GO:0016491
Mepo1g02627 384 Pfam Alcohol dehydrogenase GroES-like domain 104 166 IPR013154 -
Mepo1g02627 384 Gene3D - 217 331 - -
Mepo1g02627 384 Pfam Zinc-binding dehydrogenase 269 380 - -
Mepo1g02627 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 198 321 IPR036291 -
Mepo1g02627 384 CDD MDR_like_2 76 380 - -
Mepo1g02627 384 Gene3D - 83 380 - -
Mepo1g02627 384 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 67 384 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02627 Mepo-Chr1 27637900 27640856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02627 103 327 Monolignol Biosynthesis Gene Families AT3G19450 23.643 2.79e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02627 K18980 - gmx:100810816 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02627 1 27637900 27640856 Mepo1g02627 1 27637900 27640856 ECH