Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02616 ATGGCTCCAAATCTCAACAGTAATAGCAAGGTTTCTTCTTCAGATTCTCTTTTCACCATTTCATCTCCATTTTTACCTTTATTTCAAAATAAGAAAGATCCTGACAAAAAAAAGGATGACAAGGATAAAGGCAAGGATAAAGCTCCATCACCATCTAAGTCCGAGCCTCCGGAAAGTTCTCCGTCACAGTCGCCACCACCACCAAAGTCTCATTCACCGCCTAAAGTTTTACCTCCACCACCGTCACCACCACTACCGTCACCACCACCACCCTCTCCACCACCAAACTCACCTCCACCACCATCACCACCACCTCCATCGTTATCTCCACCTCCAGCTTTACCTCCTCCGCCACCAATGCCAAATGCACAATATTCTGCTTCTGCTTTATCATCTCCTCCTAATTCTCCCCGTAAACAACCACCTCCGTCATTGCCTCCCCCGGAGAAATCCTCTACATCTTCATCATCATCACCGCCATCATCTTCTTCTTCTTCTTCTTCTACGTCCTCGAATGATTCGCCACATAAAGCCATGCATGCAAAATCAGGGAGTTCTCATTCCTCTGGCCACACGCCCGGTGAAATAGCTGCTTATGCCGTTGCAGCAGTTTTGGTTGTCGCCATAGTTGTGGCAGCTGTTTGTTTTGCGTTTAGGAAGAAGAAAACGAAAGGGGATGCACACGTTGGACCTTATATACCACCCCCTGGTAGCTTCCAGATTAAATCAAGTGCTAATGGACATTACTATCTACAGCAACCTTCCCCTGGAAACATCTATGGCAATGTGAACGTTGAAGGACGCAGCACGAAGCACTTGGGAGGAGGAGGCGGTCCTTTAGATCCGGCGCAGCCAATAAGTGCTCAGATAGCTTTTACTTATGACATGGTAATGGAAATAACAAATGCATTTTCTAGTAAAAATGTGATAGGGCAAGGAGGATTTGGGTGTGTTTACAAGGGTTGGCTGCCGGACGGAAAAGAAGTGGCAGTCAAGACTCTTAAGGCTGGTAGTGGGCAGGGAGATAGGGAGTTCAGGGCCGAGGTGGAGATCATTAGCCGTGTTCATCATCGGCATTTGGTATCGTTGGCTGGTTATTGTATATCTGAGGAGCAAAGAGTGCTTATCTACGAGTTTGTTCCTAATGGAAATCTTCATCATCACTTGCATGGAAGTGGAATGCCAGTGTTGGCTTGGGACAAGAGGCTAAAGATAGCTATTGGTGCTGCAAAAGGCCTGGCATATCTGCATGAGGACTGTAACCAAAAGATTATTCACAGAGATATTAAATCCGCCAACATACTATTGGATGATGCTTTTGAAGCACAGGTTGCAGATTTTGGACTTGCAAAACTAGCTGATGCTGCCAATACGCATGTATCAACCAGGGTTATGGGTACCTTTGGGTACATGGCTCCAGAGTACGCAACAAGCGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTGTAACCGGAAGAAAACCAGTTGACGAAAGTAGGCCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGACCACAACTTATCCATGCTTTTGAGACGCGTGAGTTTGGTGAATTAGTAGACCCGAGACTAGAAAAACACTATGTGGAGAGTGAAATGTTCAGAATGATAGAGGCAGCTGCAGCATGTGTTCGCCACTCAGCTCCTAAACGACCTCGTATGTCTAAGGTGGTAAGAGCATTAGACACTGGAGATGAAGTATTCGATTTATCAAACGGGGTGAAATATGGTCAGAGCACTGTTTATGATTCTGGACAGTATGACAAAGACATCATGCTATTCAGGATGATGGGCAATGGCAGCTATATTGATTCTGAATTATCAATATACAGTGGAGAATCTAGTGTTTCAAGAGAACATTTGAGATCCCATCATGCATGGATACACAGTGGTTCGAGTACCGAATCAGAATCAAGAGCTTTCAATAAGCATAGAAACAGTGCTGAATAA 1998 0.4515 MAPNLNSNSKVSSSDSLFTISSPFLPLFQNKKDPDKKKDDKDKGKDKAPSPSKSEPPESSPSQSPPPPKSHSPPKVLPPPPSPPLPSPPPPSPPPNSPPPPSPPPPSLSPPPALPPPPPMPNAQYSASALSSPPNSPRKQPPPSLPPPEKSSTSSSSSPPSSSSSSSSTSSNDSPHKAMHAKSGSSHSSGHTPGEIAAYAVAAVLVVAIVVAAVCFAFRKKKTKGDAHVGPYIPPPGSFQIKSSANGHYYLQQPSPGNIYGNVNVEGRSTKHLGGGGGPLDPAQPISAQIAFTYDMVMEITNAFSSKNVIGQGGFGCVYKGWLPDGKEVAVKTLKAGSGQGDREFRAEVEIISRVHHRHLVSLAGYCISEEQRVLIYEFVPNGNLHHHLHGSGMPVLAWDKRLKIAIGAAKGLAYLHEDCNQKIIHRDIKSANILLDDAFEAQVADFGLAKLADAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDESRPLGDESLVEWARPQLIHAFETREFGELVDPRLEKHYVESEMFRMIEAAAACVRHSAPKRPRMSKVVRALDTGDEVFDLSNGVKYGQSTVYDSGQYDKDIMLFRMMGNGSYIDSELSIYSGESSVSREHLRSHHAWIHSGSSTESESRAFNKHRNSAE 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02616 665 FunFam proline-rich receptor-like protein kinase PERK8 380 592 - -
Mepo1g02616 665 MobiDBLite consensus disorder prediction 1 191 - -
Mepo1g02616 665 CDD STKc_IRAK 310 578 - -
Mepo1g02616 665 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mepo1g02616 665 MobiDBLite consensus disorder prediction 150 191 - -
Mepo1g02616 665 MobiDBLite consensus disorder prediction 30 52 - -
Mepo1g02616 665 SMART serkin_6 304 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02616 665 MobiDBLite consensus disorder prediction 1 26 - -
Mepo1g02616 665 MobiDBLite consensus disorder prediction 54 123 - -
Mepo1g02616 665 PRINTS Proline rich extensin signature 101 126 - -
Mepo1g02616 665 PRINTS Proline rich extensin signature 45 66 - -
Mepo1g02616 665 PRINTS Proline rich extensin signature 66 82 - -
Mepo1g02616 665 PRINTS Proline rich extensin signature 83 100 - -
Mepo1g02616 665 ProSiteProfiles Protein kinase domain profile. 304 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02616 665 SUPERFAMILY Protein kinase-like (PK-like) 284 577 IPR011009 -
Mepo1g02616 665 Gene3D Transferase(Phosphotransferase) domain 1 380 589 - -
Mepo1g02616 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Mepo1g02616 665 Gene3D Phosphorylase Kinase; domain 1 283 379 - -
Mepo1g02616 665 FunFam Proline-rich receptor-like protein kinase PERK8 280 379 - -
Mepo1g02616 665 Pfam Protein tyrosine and serine/threonine kinase 307 577 IPR001245 GO:0004672|GO:0006468
Mepo1g02616 665 MobiDBLite consensus disorder prediction 135 149 - -
Mepo1g02616 665 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 201 627 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02616 Mepo-Chr1 27556386 27560750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02616 190 632 Trihelix Transcription Factor Family AT1G70460 62.801 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mepo1g02616 PK_Tyr_Ser-Thr 8.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02616 - - gmx:100797563 645.966