Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02615 ATGGGTGTTGTTGAATTTCTTAGACCCTTTGTTGAGACCAAAGCTTGGGATTATGTTGTTGTTTGGAAATATGGAAATGATCCAACTAGGTTTATTGAGTGGTTAGGTTGTTGCTGTTGTGGTGGAAACATTGAGAAGGTGAAGTTGAAAGAGGAAATGAGTGAGGAATATCATTTGGCTTCAATTTGTAGGGATACCCTTTCTCATCATCCGGTTAAAACCAAGACTTGTGAGGCTCTTGCCAAGCTTCCTTTTACAATGTCTCTTTATTCTAGTGTCCATGCAGAGGTTGTAATATCACAACAACCAAGATGGCTTATCCATGAGGACTCGGTTCGAACTCAAGTTTTAATCCCTATTATTGGTGGTCTTGTTGAGCTTTTCACTGCAAAGCATATCCCAGAAGATGTAAATACCATGAAGTTCATATCAGCACACTGTTGTGTCTCTATAAAGCAAGAAGCGATAGCACATAGCTACACTAACATGAACTGCAATCCTAGCATTGACGGACACTTCATGAAATCTAATCCTTCAACTGAGCACTTACCATTTGATTCAAACTATGGTTGCTTGATTCCGCTTGAATATTTGAATCAACCACTTAAAAGCCAAAAACGCAATAAAATTTCAGTGAAACGTCGGTCTGGTTCGAGTGTCGATTGTGGAAATGGCGAAGAAGATAAAGAAAATACTGTTAAGGAGCCTCAAGAGAAAGTGTATCATGCTAAAAATCTTATCACAGAGAGAAATAGGAGGAACAGAATAAAACAAGGGCTCTTTACTCTAAGGTCTCTTGTCCCTAATATAACCAAGATGGACAGAGTAGCAATTCTTGAGGATGCGATTGAATATATAATGGAATTGCAGAGGCAAGAGATAGAACTTCAAGAAGAGGTCAAGGCTTTAGAAGTCGAGGACTGTGGGAAGAGTACACTAGAAATAAGAGTGCAAAAAGACAAAGATCTTGCAGAAGGAACCAAAAACCTACCTCTGACTGATCTCAATCAAAGTCCGTCCGATTCCACTAGAAAGCCACGGATGGAGTTGCAAGTAGAAGTGAATCATATCGCCAGAAAAGATTTCATGATTAAGTTGTCCTGTGAACAGAAGCAAGGTGTGTTTTCAAGGTTGGTGGAAGCAATGGATTCATTTGGACTGCATGTGTTAAGTGCAAACATGACCACATTTGATGGAAAAGTTTTGAACATTATTATGGTTGAGGCAATTGCGCAAGATATTCAGCCGAAGAAACTCAAAGAGTATTTGATGCAGAAAACAAGCTCAAATTCTTACCAGTCCAAAAGCATGCTGTGTTATGATCCTGCAATTCAAGGCCTCCAGTAG 1347 0.3942 MGVVEFLRPFVETKAWDYVVVWKYGNDPTRFIEWLGCCCCGGNIEKVKLKEEMSEEYHLASICRDTLSHHPVKTKTCEALAKLPFTMSLYSSVHAEVVISQQPRWLIHEDSVRTQVLIPIIGGLVELFTAKHIPEDVNTMKFISAHCCVSIKQEAIAHSYTNMNCNPSIDGHFMKSNPSTEHLPFDSNYGCLIPLEYLNQPLKSQKRNKISVKRRSGSSVDCGNGEEDKENTVKEPQEKVYHAKNLITERNRRNRIKQGLFTLRSLVPNITKMDRVAILEDAIEYIMELQRQEIELQEEVKALEVEDCGKSTLEIRVQKDKDLAEGTKNLPLTDLNQSPSDSTRKPRMELQVEVNHIARKDFMIKLSCEQKQGVFSRLVEAMDSFGLHVLSANMTTFDGKVLNIIMVEAIAQDIQPKKLKEYLMQKTSSNSYQSKSMLCYDPAIQGLQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02615 448 MobiDBLite consensus disorder prediction 208 234 - -
Mepo1g02615 448 ProSiteProfiles ACT domain profile. 363 433 IPR002912 -
Mepo1g02615 448 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 144 IPR025610 -
Mepo1g02615 448 Coils Coil 279 306 - -
Mepo1g02615 448 Pfam Helix-loop-helix DNA-binding domain 247 290 IPR011598 GO:0046983
Mepo1g02615 448 MobiDBLite consensus disorder prediction 220 234 - -
Mepo1g02615 448 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 243 304 IPR036638 GO:0046983
Mepo1g02615 448 Gene3D - 228 306 IPR036638 GO:0046983
Mepo1g02615 448 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 240 289 IPR011598 GO:0046983
Mepo1g02615 448 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 134 425 - -
Mepo1g02615 448 SMART finulus 246 295 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02615 Mepo-Chr1 27552828 27556309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02615 215 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 33.617 4.58e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g02615 bHLH-MYC_N 2.4e-15 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02615 - - mtr:25501348 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02615 1 27552828 27556309 Mepo1g02615 1 27552828 27556309 ECH