Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g02581 | ATGATGTTGATGGCATCAAAATCTGAATGGGTGGAAGTTTCAGAGGATGATGACGATGATGATGAAGAAAATGAAGATGATGATGACGATGATGAATCTAATAGCGATGGTACAAGTGAGGAGAACGAAGATGATGATGATGATGAGGAGAAAGCACAATATGCAATATTGCTTAGTGGAACTCCTGCTTTATCACGACCAATTGAACTATTCAAACAACTGGAAGCTTTGTATCCTGATGTGTATAAGAATGTTCATGAATATGGTAACTGGTATTGCAAGTGTGGAATGTTTAGACTTTATCAAGGGGCAAGTAATCATGAGGAATTGCACAATTTGATGAAGGCAACAACGATGATTCGGAGGCTTAAAAAGGATGTTCTTTCTGAACTTCCTGTAAAGTGTAGGCAACAAGTCTTCTTAGACTTGGCTGACAAGGACATGAAGCAGATTAATGCTCTATTTTGTGAGTTGGAGAGGGTAAAGGCCAAAATTAAGGCAGCTAACTCAAAAGAGGAGGCTGAATCACTCAAGTTTTCTAAACAGAATATGATTAACAAGCTTTATACTGATTCTGCAGAAGCCAAGATTCCATCTGTTCTTGATTATCTTGGAACTGTAATTGAGGTGGAGGAGAGTGAACGAAATTTGGAAATGATTTGTCTGCTTGTTTTGGATAAAAATGTTGAAACGACCAAGAAGATAGATGAAGACTGCATGCTACCATAG | 729 | 0.38 | MMLMASKSEWVEVSEDDDDDDEENEDDDDDDESNSDGTSEENEDDDDDEEKAQYAILLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNWYCKCGMFRLYQGASNHEELHNLMKATTMIRRLKKDVLSELPVKCRQQVFLDLADKDMKQINALFCELERVKAKIKAANSKEEAESLKFSKQNMINKLYTDSAEAKIPSVLDYLGTVIEVEESERNLEMICLLVLDKNVETTKKIDEDCMLP | 242 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g02581 | 242 | MobiDBLite | consensus disorder prediction | 12 | 50 | - | - | |
| Mepo1g02581 | 242 | Coils | Coil | 151 | 171 | - | - | |
| Mepo1g02581 | 242 | PANTHER | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER | 50 | 211 | - | - | |
| Mepo1g02581 | 242 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 52 | 133 | IPR027417 | - | |
| Mepo1g02581 | 242 | Gene3D | - | 48 | 146 | IPR038718 | - | |
| Mepo1g02581 | 242 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Mepo1g02581 | 242 | Pfam | SNF2-related domain | 52 | 176 | IPR000330 | GO:0005524|GO:0140658 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo1g02581 | Mepo-Chr1 | 27250018 | 27259405 | Dispersed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | SNF2 | Mepo1g02581 | SNF2_N | 2.3e-10 | CL0023 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g02581 | K14440 | - | csin:114287449 | 274.633 |