Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02564 ATGGAGCTATTCCCAGCACAACCAGATTTATCATTGCAAATCAGTCTTCCAAACAGCAAACAAACATCAAGTTGGAGGAGAAATACAGATGATCAAGAAGAGTTGGATGATTTAGGATTTTGGAAAAGAGCTTTGGAGTCAAAAACAGAAGCAAATCACACCTTTGGCCCTTCCCTTTCCAACCTAAGGGCTCCTTCTTCTTCTTCAAACCTCTACAATCTCATACCTAACCCTTTTCAAAACACTAATAATTCCAACAACAACTCTTTTCAACCATTTCATCAAAACCAAAACAATTACCAAAGCCTAAGTGAAGAGCTAGGGTTTCTTAAACCTATAAGAGGAATTCCAGTGTATCATCAAAACCCTAATCCTCCTATTGCATTATTTTCTCAACCAAAACCACCCTTTGATGCATCTGCTTCAAGTTCAACAACAGCTTTTCATCCTCATACTTTGATGAGATCAAAGTTGTTGCCGAGGTTTCCTTCAAAGCGTAGCGTGAGAGCTCCGAGGATGCGTTGGACTACCACTCTTCATAATCGCTTTGTTCATGCTGTTGAGCTTTTAGGTGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAGCTAATGGATGTAAAGGATTTAACCCTATCACATGTTAAATCTCATTTGCAGATGTACCGGACGGTGAAAATTACAGATAGACCACCAGCATCATCAGGTCAATCTGATATGTATGACAATGGTTCATCTGGAGATACTTCTGAAGACTTCATGCTTGACATAAACTCTTCAACAAGGTCTAATGATCTGCCAGTTAAGTTGGGTGCCGAAATTACCAATCAAGATAAAGAAAATCATAGTATTTGGAGCAAATCTTCAAGTAACAGGGAAGCTTGGTTGCATGGTAAGCCAAAGGTCCATCCTGTTGGAAATGTGTCTTCTCTTGAGGAAATGGATCCAAAGTGTCTAAGCAACGAAAGATGTTCATCAGATGGAAGCTCTTCCTCAAACATTTCGGGAACAAGCTTAAAGAATCCAAATTTGGAATTCACATTAGGCAACTCAGTTTGA 1059 0.3957 MELFPAQPDLSLQISLPNSKQTSSWRRNTDDQEELDDLGFWKRALESKTEANHTFGPSLSNLRAPSSSSNLYNLIPNPFQNTNNSNNNSFQPFHQNQNNYQSLSEELGFLKPIRGIPVYHQNPNPPIALFSQPKPPFDASASSSTTAFHPHTLMRSKLLPRFPSKRSVRAPRMRWTTTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRPPASSGQSDMYDNGSSGDTSEDFMLDINSSTRSNDLPVKLGAEITNQDKENHSIWSKSSSNREAWLHGKPKVHPVGNVSSLEEMDPKCLSNERCSSDGSSSSNISGTSLKNPNLEFTLGNSV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02564 352 MobiDBLite consensus disorder prediction 73 94 - -
Mepo1g02564 352 MobiDBLite consensus disorder prediction 11 25 - -
Mepo1g02564 352 NCBIfam myb-like DNA-binding domain, SHAQKYF class 171 224 IPR006447 GO:0003677
Mepo1g02564 352 MobiDBLite consensus disorder prediction 1 32 - -
Mepo1g02564 352 MobiDBLite consensus disorder prediction 322 352 - -
Mepo1g02564 352 FunFam Myb family transcription factor 169 227 - -
Mepo1g02564 352 MobiDBLite consensus disorder prediction 319 352 - -
Mepo1g02564 352 SUPERFAMILY Homeodomain-like 168 224 IPR009057 -
Mepo1g02564 352 Gene3D - 170 227 - -
Mepo1g02564 352 Pfam Myb-like DNA-binding domain 172 223 IPR001005 -
Mepo1g02564 352 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 350 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mepo1g02564 352 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02564 Mepo-Chr1 26997279 27003460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02564 1 349 G2-like Transcription Factor Family AT4G17695 40.162 1.74e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo1g02564 Myb_DNA-binding 4.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02564 - - aprc:113868756 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02564 1 26997279 27003460 Mepo1g02564 1 26997279 27003460 ECH
Mepo5g01356 5 14034508 14040544 Mepo1g02564 1 26997279 27003460 PCT