Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02562 ATGAGCTTCCAGGATATTGAAGCTGGCCGGCCGTTCGGTTCGAGACGCGGCGGACCGATCAACGGGAAGCAAGACCCAACGCAAGCGGTGGCTGCCGGAATTTTTCAGATCAACACCGCCGTTTCAACGTTTCAGAGACTTGTTAATACCCTTGGAACCCCCAAAGATACCCCTGAGCTTCGTGAAAAGCTTCACAAGACAAGACAACATATTGGGCAGTTGGTGAAGGATACATCTGCCAAGCTTAAACAAGCTAGTGACATTGATCACCATGCCGATGTTAATGCAAGCAAGAAGATAGCAGATGCTAAACTTGCTAAAGATTTTCAAGCAGTGTTGAAAGAGTTTCAGAAGGCACAACGTCTTTCAGCTGAGAGGGAAACAGCTTACACTCCTTTTGTTCCACAAGCAGTTCTTCCTTCGAGCTACACAGCTAGTGAAATGGATATTGGTTCTGATAAGACACCAGAACAGCGTGCCCTTCTTGTGGAATCCAGAAGGCAGGAGGTTTTATTCTTAGATAATGAGATTGCCTTCAATGAGGCAATCATTGAGGAAAGGGAGCAAGGCATTCAAGAAATACAGCAGCAAATTGGTGAAGTTAATGAAATTTTCAAAGATCTTGCTGTGCTTGTCCATGAACAAGGAACCATGATTGATGATATTGGTTCCAACATTGAGAACTCCCATGCAGCAACCGCACAAGCAAAGTCTCAACTTGCAAAAGCTTCAAAAACACAAAGATCAAATTCATCTTTGGCATGCTTGCTTTTGGTCATATTTGGGATTGTGCTTCTCATCTTGATCATAATTCTTGCTGCTTAG 825 0.4388 MSFQDIEAGRPFGSRRGGPINGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRQHIGQLVKDTSAKLKQASDIDHHADVNASKKIADAKLAKDFQAVLKEFQKAQRLSAERETAYTPFVPQAVLPSSYTASEMDIGSDKTPEQRALLVESRRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQAKSQLAKASKTQRSNSSLACLLLVIFGIVLLILIIILAA 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02562 274 FunFam Syntaxin-22 like 174 274 - -
Mepo1g02562 274 ProSitePatterns Syntaxin / epimorphin family signature. 187 226 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mepo1g02562 274 SUPERFAMILY t-snare proteins 24 236 IPR010989 GO:0016020|GO:0016192
Mepo1g02562 274 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 181 243 IPR000727 -
Mepo1g02562 274 SMART tSNARE_6 176 243 IPR000727 -
Mepo1g02562 274 Pfam Syntaxin-like protein 31 130 IPR006011 GO:0016020
Mepo1g02562 274 Pfam SNARE domain 217 269 IPR000727 -
Mepo1g02562 274 CDD SynN 24 149 IPR006011 GO:0016020
Mepo1g02562 274 CDD SNARE_Qa 201 242 - -
Mepo1g02562 274 PANTHER SYNTAXIN 27 265 IPR045242 -
Mepo1g02562 274 MobiDBLite consensus disorder prediction 1 26 - -
Mepo1g02562 274 FunFam Syntaxin-22 like 21 134 - -
Mepo1g02562 274 Gene3D - 21 134 - -
Mepo1g02562 274 Gene3D - 175 274 - -
Mepo1g02562 274 SMART SynN_4 15 128 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02562 Mepo-Chr1 26960752 26966114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02562 1 262 SNARE and Associated Proteins AT5G46860 77.099 6.57e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02562 - - gmx:547656 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01364 5 14158751 14162806 Mepo1g02562 1 26960752 26966114 PCT