Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02543 ATGTCAAAACGTGCTTCAAGAGGAAAAAAGGTTCCATTGCTGAAGCTTTTCTCCTTTGCTGACTTCTATGATTATGTCTTGATGGCCCTTGGATCTATTGGGGCATGCATTCATGGTGCATCTGTTCCTGTTTTCTTTATCTTCTTTGGAAAAATTATTAATGTCGTAGGTTTGGCTTACCTTTTTCCTAAAGAAGCTTCCCACCAAGTTGCCAAGTATGCATTGGATTTTGTGTATCTAAGTATAATAATATTGTTCTCCTCATGGGCAGAGGTGGCTTGCTGGATGCATACTGGAGAACGTCAAGTAGCAAAGATGAGGATGGCATATTTAAGATCAATGTTAAATCAAGATATAAGTCTTTTTGATACTGAGGGGTCCACTGGAGAGGTTATTTCTTCTATTACAAGTGACATCATTGTTGTTCAAGAAGCTTTATCTGAGAAGGTTGGGAACTTTATGCACTTTATAAGCCGATTTATAGCAGGCTTTATCATCGGTTTTTTAAGAGTTTGGCAGATCAGTTTAGTGACACTTGCTATTGTTCCTTTGATTGCTATTGCTGGAGGTCTTTATGCATATGTGACTTTTGGCCTTATCGCAAAAGTTCGTAAATCATATCTAAGGGCGGGTGAAATTGCTCAGGAGGTGATAGGAAATGTGAGAACTGTGCAAGCATTTGGAGGAGAACAAAGAGCAGTGATATCATACAAAGTGGCTCTGAGGAACACATATAAGAATGGTCGAAAAGCCGGTTTAGCCAAGGGTCTAGGACTAGGCTCTATGCATTGTGTTCTTTTTCTATCATGGGCTCTGCTTGTTTGGTTCACCAGTATTATTGTTCACAAGAACATCGCCAATGGTGGAAAGGCTTTCGCAACCATGCTCAATGTGGTGATCTCTGGCCTGTCACTCGGGCAGGCAGCACCAGATGTTTCTGCATTTATCAGAGCAAAAACAGCAGCTTATCCCATTTTTGAGATGATAGAAAGAGACATAGTTAGCAAAAATAGCTCAAAAGATGATCGAAAATTAAAAAAAGTTGACGGTCACATACAATTTGTTAATGTCTGTTTCAGTTACCCATCTCGCCCTGATGTTGTTATTTTCAATAGTCTTTGTCTTGAGATTCCTTCAGGTAAAGTTTTGGCCCTTGTAGGAGGGAGTGGCTCGGGAAAAAGCACAGTTATATCGTTAATCGAGCGTTTCTATGAACCAATTTCTGGTCAAATTCTGTTAGATAGGAATGATATAAGGGAACTTGATATAAAATGGCTTAGACATCAAATTGGACTAGTTAATCAAGAGCCTGCACTTTTTGCTACAAGCATAAGGGAGAACATATTGTATGGTAAAAATGATGCCACTCCTGAAGAACTAAACCGTGCTTTGGAACTTTCTGATGCTCTTTCTTTCATCAACAATCTTCCTGATGGATTAGATACTCAGGTTGGTGAGAGAGGAATACAATTATCAGGGGGACAAAAGCAGCGAATTGCAATATCTCGTGCTATAGTTAAAAATCCATCAATCCTATTATTAGATGAGGCAACCAGTGCTTTGGATGCAGAGTCGGAGAAAAGTGTACAAGAAGCTCTTGATCATGTCATGATTGGTAGAACAACTGTGATAGTTGCACACAGACTTTCTACCATTAGGAATGCAGATATGATAGCTGTTGTTGAAGGAGGGAGCATTGTGGAAACTGGAATTCATGAGGAACTCATTTCGAACTCAAACAGTGTATATGCATCTCTTGTTCAAGGCCAACCTTCTCCAGATCCTAGCTTGGGACAGTCATCAAGGTACTTCATTCTTATCCATAATTGGAATTCATTCACAATTCCTGCTATCACACTTATGTGTATACATGTTTTTAATTGTAGCATAAAGAACTCAGCAGAAATATCCCATACAGCAACAATTGGTGGTAGTTTTCATTCAGATAGAAGCTCTATTGGCCATGCACTTGCTGATGAACCAAGAAGTGTTGAAAAGCCAAGGCATGTTTCATTAATAAGGTTATATTCAATGATTGGTCCTTATTGGTCTTATGGAGTTTTTGGAACCTTAGCTGCTTTTACTACTGGTGCTCTTATGCCACTTTTTGCTCTTGGAATATCTCATGCCCTTGTATCATATTATATGGACTGGGATAGCACACGCCACGAAGTGAAAAAAATTGCATTCCTCTTCTGTGGAGCAGCAATTGTAGCTATCACGGCTTATTCCATTGAACATCTTTCTTTTGGAATCATGGGAGAACGACTTACCCTTCGTGTCAGAGGAATTATGCTTACTGCTATTTTGAAGAATGAAATCGGTTGGTTTGATGATACAAGAAACACAAGTTCTATGCTTTCATCACGTTTAGAGACCGATGCAACTTTGTTAAAGACTATAGTCGTGGACCGTTCTACAATTCTCTTGCAGAATGTTGGCCTAGTTGTTACTGCACTTATTATTGCATTCATTTTGAACTGGAGGATAACACTTGTTGTCTTGGCCACATATCCTTTGATAATAAGTGGTCACATTGGTGAGAAACTGTTCATGCAAGGATTTGGTGGTAATCTAAGCAAAGCATATCTAAAAGCAAACATGTTAGCTGGGGAGGCTGTTAGTAATATAAGGACTGTGGCTGCATTCTGTGCAGAAGAAAGGGTTATTGAACTTTATGCTGATGAGCTTGTTGAGCCTTCCAAACGTTCATTCAAACGAGGCCAAATTGCTGGCATATTTTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCTTAGCCTTGTGGTATGGATCTGTGTTGCTCGAAAAGGAGCTTGCTAGCTTTAAATCAATCATGAAGTCATTTATGGTTTTAATAGTAACAGCCTTGGCTATGGGGGAGACTTTGGCACTTGCACCAGACCTTTTGAAAGGGAATCAAATGGTTTCATCAATTTTTGACATGATAGATAGAAAGTCAGGAATAATACATGATGTTGGAGAAGAGTTGATGACAGTGGAAGGAACGATTGAGCTAAAAAGGATCAATTTTAACTATCCTTCAAGACCAAATGTTGTTATTTTTAAGGATTTCAATCTAATAGTGCCTTCAGGGAAGAGTCTTGCCTTGGTAGGGCACAGTGGTTCTGGTAAAAGCTCAATAATCTCCCTTATACTCCGATTTTATGATCCAACATCCGGGAAGGTGATGATTGATGGAAAAGATATCAAGAAAATGAATTTGAAATCCCTTAGGAAGCAAATTGGTCTAGTACAACAAGAACCAGCTCTATTTGCAACATCAATTTACAAAAACATTCTATATGGAAAAGAAGAAGCATCTGAATCAGAAGTGATTGAAGCGGCTAAACTAGCCGACGCTCATAATTTCATCAGCGCACTTCCCGATGGCTACTCAACCAAAGCAGGCGATAGAGGAGTTCTACTATCCGGTGGACAAAAGCAAAGGGTGGCCATTGCAAGAGCTATTTTAAGAAACCCTAAAATATTATTGCTGGATGAAGCAACAAGTGCACTAGATGTCGAATCGGAACGTGTTGTACAACAAGCTTTAGACAAGTTGATGCAAAACAGAACAACAATTATTGTGGCACATAGGTTATCAACAATAAGAAATGCAGATCAAATAGCAGTTTTGCAGGATGGAAAGATTATTGAGCAAGGCACTCATTCAAGTCTTTTTGAGAATACAGATGGAGCTTACTTCAAATTAGCCAGCCTACAACAAGAAACAGCTACATTAACAGCTTACTACTGGACCACCGCTGGGCTTTGGCAAGTTTTACGCGTCAGTTTGCAGCAGTTTTCGTCTACTACAGCGGTGTTATCTGATGTTTTTCCGGCGAAGCAGAAGGTGTAG 3867 0.3938 MSKRASRGKKVPLLKLFSFADFYDYVLMALGSIGACIHGASVPVFFIFFGKIINVVGLAYLFPKEASHQVAKYALDFVYLSIIILFSSWAEVACWMHTGERQVAKMRMAYLRSMLNQDISLFDTEGSTGEVISSITSDIIVVQEALSEKVGNFMHFISRFIAGFIIGFLRVWQISLVTLAIVPLIAIAGGLYAYVTFGLIAKVRKSYLRAGEIAQEVIGNVRTVQAFGGEQRAVISYKVALRNTYKNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIIVHKNIANGGKAFATMLNVVISGLSLGQAAPDVSAFIRAKTAAYPIFEMIERDIVSKNSSKDDRKLKKVDGHIQFVNVCFSYPSRPDVVIFNSLCLEIPSGKVLALVGGSGSGKSTVISLIERFYEPISGQILLDRNDIRELDIKWLRHQIGLVNQEPALFATSIRENILYGKNDATPEELNRALELSDALSFINNLPDGLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDHVMIGRTTVIVAHRLSTIRNADMIAVVEGGSIVETGIHEELISNSNSVYASLVQGQPSPDPSLGQSSRYFILIHNWNSFTIPAITLMCIHVFNCSIKNSAEISHTATIGGSFHSDRSSIGHALADEPRSVEKPRHVSLIRLYSMIGPYWSYGVFGTLAAFTTGALMPLFALGISHALVSYYMDWDSTRHEVKKIAFLFCGAAIVAITAYSIEHLSFGIMGERLTLRVRGIMLTAILKNEIGWFDDTRNTSSMLSSRLETDATLLKTIVVDRSTILLQNVGLVVTALIIAFILNWRITLVVLATYPLIISGHIGEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEERVIELYADELVEPSKRSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLLEKELASFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVSSIFDMIDRKSGIIHDVGEELMTVEGTIELKRINFNYPSRPNVVIFKDFNLIVPSGKSLALVGHSGSGKSSIISLILRFYDPTSGKVMIDGKDIKKMNLKSLRKQIGLVQQEPALFATSIYKNILYGKEEASESEVIEAAKLADAHNFISALPDGYSTKAGDRGVLLSGGQKQRVAIARAILRNPKILLLDEATSALDVESERVVQQALDKLMQNRTTIIVAHRLSTIRNADQIAVLQDGKIIEQGTHSSLFENTDGAYFKLASLQQETATLTAYYWTTAGLWQVLRVSLQQFSSTTAVLSDVFPAKQKV 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02543 1288 Gene3D ABC transporter type 1, transmembrane domain 651 847 IPR036640 GO:0005524|GO:0016020
Mepo1g02543 1288 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 687 973 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g02543 1288 ProSitePatterns ABC transporters family signature. 491 505 IPR017871 GO:0005524|GO:0016887
Mepo1g02543 1288 FunFam ABC transporter B family member 4 996 1250 - -
Mepo1g02543 1288 FunFam ABC transporter B family member 1 342 591 - -
Mepo1g02543 1288 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 352 588 IPR003439 GO:0005524
Mepo1g02543 1288 Pfam ABC transporter 1025 1173 IPR003439 GO:0005524
Mepo1g02543 1288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1244 IPR027417 -
Mepo1g02543 1288 Pfam ABC transporter 372 519 IPR003439 GO:0005524
Mepo1g02543 1288 SMART AAA_5 379 565 IPR003593 GO:0016887
Mepo1g02543 1288 SMART AAA_5 1033 1219 IPR003593 GO:0016887
Mepo1g02543 1288 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 29 317 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g02543 1288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 589 IPR027417 -
Mepo1g02543 1288 SUPERFAMILY ABC transporter transmembrane region 668 987 IPR036640 GO:0005524|GO:0016020
Mepo1g02543 1288 Gene3D ABC transporter type 1, transmembrane domain 906 1250 IPR036640 GO:0005524|GO:0016020
Mepo1g02543 1288 ProSitePatterns ABC transporters family signature. 1145 1159 IPR017871 GO:0005524|GO:0016887
Mepo1g02543 1288 Pfam ABC transporter transmembrane region 31 300 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g02543 1288 Pfam ABC transporter transmembrane region 688 959 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo1g02543 1288 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1006 1242 IPR003439 GO:0005524
Mepo1g02543 1288 CDD ABC_6TM_Pgp_ABCB1_D1_like 28 325 - -
Mepo1g02543 1288 PANTHER ABC TRANSPORTER B FAMILY 6 589 IPR039421 -
Mepo1g02543 1288 SUPERFAMILY ABC transporter transmembrane region 15 322 IPR036640 GO:0005524|GO:0016020
Mepo1g02543 1288 CDD ABC_MTABC3_MDL1_MDL2 1006 1244 - -
Mepo1g02543 1288 Gene3D - 996 1245 IPR027417 -
Mepo1g02543 1288 Gene3D - 342 591 IPR027417 -
Mepo1g02543 1288 CDD ABC_6TM_Pgp_ABCB1_D2_like 676 991 - -
Mepo1g02543 1288 CDD ABC_MTABC3_MDL1_MDL2 352 590 - -
Mepo1g02543 1288 Gene3D ABC transporter type 1, transmembrane domain 15 595 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02543 Mepo-Chr1 26789576 26804489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02543 689 1252 Calmodulin-binding Proteins AT2G36910 42.188 2.27e-123 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02543 K05658 - gmx:100819045 1947.94