Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02540 ATGTCTTTATCGGAACCTAAGTACGACACCCCACCGGCTCCAGCACATAAGACCCCACCGGCACTAGTAGCCTTCTCCCTCACTGTCCTCATCCTATGCTTTGTGGCTTTCAGCATTGTGTATCTTTGCAAGTATTGCTTTGCAGGCATTTTCCATATGTGGGCCTTGCATCGCACGGCCTCAGGATCCCTCGTTCGTCTCTCACCTGATAGGTCACCTCCTAGAGGACTCGCCACCACCCTTATAGATGGATTCCCCACTTTCCTCTACTCTGATGTGAAAGACCACCGCAAGGAAAAAAGTTACAGCTTAGAATGTGCTATTTGCTTGCTAGAGTTCGAGGATGATAGCTTGCTTCGTCTCCTAACCATTTGTTTCCATGTTTTCCACCAAGAATGTATCGACTTGTGGTTTGAATCTCACAAGACATGTCCCGTTTGTCGAACCGACCTTGATGCACCTCCCAGCCAAACGTCAAAACACGGGGAATGTTGCAACAATAACAACAACACTAACAACGACAACAACAACCTTAATGCACAAGAGGGTATAGCGTCGTTACCGTGCAATGATACACGCATTGATGTTAGAGGAGAGGAAAGTGACAATACTAGTGAGATCACTAGAGATCAAATACATGAAGGTGAACAACGTGATGATCATGTGAGCAAGAGCATGCAACAAGAAGAACATATATTTTCAAGATCACATTCAACGGGGCATTCTATAGTAATGATTAGAGGTGAAGAAAAAGATGATGAAAAATATACATTGAGATTGCCTGAACATGTTATAAGGGGAGGACACAATATCACAAAGAGTTGTACAAATTACAATGAGATGACATTGACAATGCCTACACCTTGTAGTAATTGTGGTTTTGTTAAACCGGTATCTGGTTCCTCTTCACTTGCTCATGCTCAAGAGGCTTGA 933 0.4362 MSLSEPKYDTPPAPAHKTPPALVAFSLTVLILCFVAFSIVYLCKYCFAGIFHMWALHRTASGSLVRLSPDRSPPRGLATTLIDGFPTFLYSDVKDHRKEKSYSLECAICLLEFEDDSLLRLLTICFHVFHQECIDLWFESHKTCPVCRTDLDAPPSQTSKHGECCNNNNNTNNDNNNLNAQEGIASLPCNDTRIDVRGEESDNTSEITRDQIHEGEQRDDHVSKSMQQEEHIFSRSHSTGHSIVMIRGEEKDDEKYTLRLPEHVIRGGHNITKSCTNYNEMTLTMPTPCSNCGFVKPVSGSSSLAHAQEA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02540 310 SMART ring_2 106 147 IPR001841 -
Mepo1g02540 310 Pfam Ring finger domain 105 148 IPR001841 -
Mepo1g02540 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 154 IPR013083 -
Mepo1g02540 310 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Mepo1g02540 310 MobiDBLite consensus disorder prediction 195 220 - -
Mepo1g02540 310 PANTHER RING FINGER DOMAIN-CONTAINING 15 151 - -
Mepo1g02540 310 FunFam E3 ubiquitin-protein ligase ATL6 66 154 - -
Mepo1g02540 310 SUPERFAMILY RING/U-box 82 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02540 Mepo-Chr1 26774587 26775519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02540 4 282 C3H Transcription Factor Family AT2G35420 30.634 1.36e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02540 - - gmx:100815505 321.242