Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02537 ATGAAGATTGAAGATTCTTGTGGTAATACAATGGCTTTGGAAACTCTTTCATCACCATGCAATGAGTTTTCAAACTTCATTATCTATGACACAATTTCTGCAACTCCATTTAGTAGTAACCATATTGATACTACAAATGAGTCAAGTTTCTTGGAAAATACAATGAACTATGATCATGAACAAGCACATCATGAGGCAGATGCTGCAATATTTGATCATAGTAACTGTTCCATGATGAATAGTAGAAAAAGACAATCTATGGAACAAGAAGAAACGATGAATAATCCTCAAGTGGTGCAAAGGAAAAAGAGGAGAAGAAAACCAAGAGTTTGTAAGAACAAAGAAGAAGCTGAGACACAAAGAATCACACATATTACTGTTGAAAGAAACCGTAGAAAACAAATGAATGAACATCTTGCTGTACTTCGTTCACTCATGCCTGAATCCTATGTTCAAAGGGGTGACCAAGCCTCAATAGTAGGTGGTGCCATAGAGTTTGTGAAGGAGCTAGAGCATCTCTTGCAATCACTTGAAGCTAGAAAGTTACAACTTTTACAACAAGAAGTAGCACAAAACAATGAAGACATGGCATTATCAAAACCCCCTTTTGCACAATTTTTTGTGTATCCTCAATATACATGGTCCCAAACACCTAACAAATACACATCCAAGACCAAAGCTGCTATAGCTGATATCGAGGTTACATTGATCGAGACTCATGCAAACCTTAGAATTCTCACTAGGACAAAACCAGGACAACTAACTAAATTAGTGGCTGGTTTTCAAACACTCTTCCTTACTATCCTACATCTCAATGTCACTACCATACAACCTTTGGTATTCTACTCTATCAGTGCCAAGGTTGAAGAAGGATTCCAACTTGGTTCAGTAGACGGAATTGCAACAGCAGTTCACCATTTACTTGGAAGAATTGAGGAAGAAGCTTCACTAATTTGTTGTTAA 963 0.3707 MKIEDSCGNTMALETLSSPCNEFSNFIIYDTISATPFSSNHIDTTNESSFLENTMNYDHEQAHHEADAAIFDHSNCSMMNSRKRQSMEQEETMNNPQVVQRKKRRRKPRVCKNKEEAETQRITHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEARKLQLLQQEVAQNNEDMALSKPPFAQFFVYPQYTWSQTPNKYTSKTKAAIADIEVTLIETHANLRILTRTKPGQLTKLVAGFQTLFLTILHLNVTTIQPLVFYSISAKVEEGFQLGSVDGIATAVHHLLGRIEEEASLICC 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02537 320 Coils Coil 167 194 - -
Mepo1g02537 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 119 170 IPR011598 GO:0046983
Mepo1g02537 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 118 188 IPR036638 GO:0046983
Mepo1g02537 320 MobiDBLite consensus disorder prediction 84 117 - -
Mepo1g02537 320 PANTHER MAX DIMERIZATION, MAD 54 315 - -
Mepo1g02537 320 Pfam Helix-loop-helix DNA-binding domain 120 171 IPR011598 GO:0046983
Mepo1g02537 320 Gene3D - 111 191 IPR036638 GO:0046983
Mepo1g02537 320 SMART finulus 125 176 IPR011598 GO:0046983
Mepo1g02537 320 CDD bHLH_AtFAMA_like 122 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02537 Mepo-Chr1 26752067 26754971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02537 111 288 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 57.143 7.60e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g02537 HLH 5.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02537 - - pvu:PHAVU_003G284500g 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02537 1 26752067 26754971 Mepo1g02537 1 26752067 26754971 ECH