Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02534 ATGGCGTTTGAAAATCAAGATACTGTCCGTGAAATTAAGCCCAAAAACAGAAGAATCATGGGTGCTGGAGGACCTGATGATGAGGAAAACAGGTGGCCACCATGGTTGAAACCTTTGCTCAAAGAGCGTTTCTTTGTTCAATGCAAGTTGCATGCTGATTCACACAAGAGTGAGTGCAATATGTATTGTTTGGATTGTATGAATGGTGCTCTTTGCTCACTCTGCCTCAATTACCACAAAGATCATCGTGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAAGTGTTGGACATAACAGGTGTTCAAACCTATATTATCAACAGTGCAAGGGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGAAAAGGTGTCACCAACACCTGTGAAGTCTGCGAGCGTAGCCTTCTCGATTCCTTTCGATTCTGTTCTCTTGGCTGCAAGATTGTTGGAACTTCAATGAATTTCCAGAAGAAGAACAAGTCAGCTCGGGCTTCAATGATATCAGACTCAGAGGATTCACACAGCAGCAGTTGCAGCCATGGAAGACTGAAGAACATTAAGGTGCAAAGCTTCACTCCTTCGACACCACCACCAACAGTCAATTACAGATCAGCCAAAAGAAGAAAGGGAATTCCACATCGCGCCCCAATGGGAGGACTAGTGCTGCAATACTAA 708 0.4421 MAFENQDTVREIKPKNRRIMGAGGPDDEENRWPPWLKPLLKERFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSMNFQKKNKSARASMISDSEDSHSSSCSHGRLKNIKVQSFTPSTPPPTVNYRSAKRRKGIPHRAPMGGLVLQY 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02534 235 CDD Bbox2 48 87 - -
Mepo1g02534 235 MobiDBLite consensus disorder prediction 197 235 - -
Mepo1g02534 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 26 228 - -
Mepo1g02534 235 Pfam PLATZ transcription factor 88 159 IPR006734 -
Mepo1g02534 235 MobiDBLite consensus disorder prediction 197 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02534 Mepo-Chr1 26713677 26717044 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mepo1g02534 PLATZ 4.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02534 - - mtr:11444793 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02534 1 26713677 26717044 Mepo1g02534 1 26713677 26717044 ECH
Mepo5g01386 5 14377622 14379418 Mepo1g02534 1 26713677 26717044 PCT