Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02521 ATGGCTTCCGATAGCTTCACCGACAAGAACGCTGTTTTCAGAAAACTCAAAACCAAATCCGAAAACAAGAGTTGTTTCGATTGCAATGCGAAGAATCCAACATGGGCGTCTGTAACGTATGGGATCTTTCTCTGCATTGATTGCTCTGCTGTTCATCGAAGTCTCGGTGTTCACATCAGTTTTGTGAGATCTACGAACTTAGACTCGTGGACTCCTGAGCAACTTAAAATGATGAGCTTTGGAGGAAACAGTAGGGCACAAGTTTTCTTTAGGCAGCATGGATGGAACGGAGATGGTAAAGTAGAGGCAAAGTATACATCCAGGGCTGCAGAATTGTATAAGCAACTGCTTTCAAAGGAAGTTGCCAAAAGTATGTCTGAGGAGGCTGCCTTGTCTGCACCACCTGCTGCTTCTTCCCAGTCTGCCCAAGGAGCTAATGGACTTCCTGATGTTAAGACAAATGAAGTCCCAATTGAAAAGACTGTTGAAAAAACTGTGGAGAAGCCAGAAAAGACCGAGAGCACTTCTTCACCAAGAGCTTCATATACTGCAGTTTCAAATAATTTGAAGAAGCCTATTGGAGCCAAAAAAACTGGTAAGAGTGGGGGGCTTGGAGCCCGTAAGCTCACTAGAAAGCCAAGTGAGTCCCTCTATGAGCAGAAGCCTGAAGAACTACCTGCGCCAGTTTCATCATCGACAATTACAAAAAACAACTTGCCTTCTGGGCCACCTCTAACATCTCGGTTTGAGTATACAGAAGATGTCCAATCATCTGAGTTGAATTCTGGAGGTTCAAATGTAACCGGTCACGTGTCTGTACCAAAGTCATCATCAAGCTTCTTTTCGGACTTCGGAATGGATAGTGGCTTTCAAAAGAAATCTGGGCCAAGCTCCTCCAAAGTACAAATTCAGGAATCTGATGAAGCGAGAAAGAAGTTCTCAAATGCAAAGTCTATTTCTTCATCCCAATTTTTTGGAGACCAGAACAAAGCCAATGCGGATGCTCAAGCAACTTTATCAAAGTTTTCAGGTTCATCTGCCATCTCCAGTGCTGATCTTTTTGGTGACTCGAGTGACAACTCCGTTGATCTTGCTGCTAGTGACCTTATCAATAGAATATCTTTCCAGGCACAACAGGATATCTCTTCCCTTAAGAACATTGCTGGAGAGACTGGGAAAAAACTCACCTCCTTGGCTTCCTCCTTGATGACAGATCTTCAGGATCGGATCCTCTAA 1236 0.4385 MASDSFTDKNAVFRKLKTKSENKSCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNSRAQVFFRQHGWNGDGKVEAKYTSRAAELYKQLLSKEVAKSMSEEAALSAPPAASSQSAQGANGLPDVKTNEVPIEKTVEKTVEKPEKTESTSSPRASYTAVSNNLKKPIGAKKTGKSGGLGARKLTRKPSESLYEQKPEELPAPVSSSTITKNNLPSGPPLTSRFEYTEDVQSSELNSGGSNVTGHVSVPKSSSSFFSDFGMDSGFQKKSGPSSSKVQIQESDEARKKFSNAKSISSSQFFGDQNKANADAQATLSKFSGSSAISSADLFGDSSDNSVDLAASDLINRISFQAQQDISSLKNIAGETGKKLTSLASSLMTDLQDRIL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02521 411 Pfam Putative GTPase activating protein for Arf 12 113 IPR001164 GO:0005096
Mepo1g02521 411 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Mepo1g02521 411 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 5 411 - -
Mepo1g02521 411 Gene3D Arf GTPase activating protein 1 139 IPR038508 -
Mepo1g02521 411 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Mepo1g02521 411 MobiDBLite consensus disorder prediction 132 271 - -
Mepo1g02521 411 MobiDBLite consensus disorder prediction 290 314 - -
Mepo1g02521 411 MobiDBLite consensus disorder prediction 156 174 - -
Mepo1g02521 411 CDD ArfGap_ArfGap2_3_like 8 123 - -
Mepo1g02521 411 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Mepo1g02521 411 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Mepo1g02521 411 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Mepo1g02521 411 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Mepo1g02521 411 MobiDBLite consensus disorder prediction 226 271 - -
Mepo1g02521 411 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Mepo1g02521 411 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02521 Mepo-Chr1 26496998 26503542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02521 13 90 C2H2 Transcription Factor Family AT4G21160 46.835 4.46e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02521 K12493 K11855 gmx:100785169 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02521 1 26496998 26503542 Mepo1g02521 1 26496998 26503542 ECH