Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02484 ATGATGAAGATGAAAGTGTTGAGTAAGAAGAACAATAATGTTATCTTCTTTTGGTGGTTTGGAATGATTGTGAAGTTGTGTTTCTTGCTATGTGTTTGTGCTGACAAGACATCATTGAGAGGAGGATCAAAGAAGATCAATAGCCTAAAATCAACATCAACAGTCAAGCTGAATACAGAAGACCAACACCAGTTGGTTGTTGACAATGGCATTGTTTCTGTGTCTATGGCAAGACCAGAAGGGTACATCCTTGGAATATCGTATAATGGAATTGACAACATTCTTGATTCTGAAAACAAAGAACTAGATAGAGGGTACTTCGATGTTGTTTGGAATCAACCAGGAGAGCAAAATCTTAGTAAAAGTATTTTTCAGAGAATCCATGGGACAAACTTTTTAGTTATTGCAGCTGATGACAATATGGTGGAGGTTTCATTTTCAAGATTATGGACACCTTCCATGAGTGGCACAAATGTCCCCATAAACATAGATATAAGGTACATTTTCAGAAGTGGTGATTCTGGATTTTATTCATATGCAATATTCAATCGACCCAAAGGAATGCCTGGAGTTGAGGTTGATCAAATTAGATTTGTTTTCAAACTCAATAAAGACAGGTTCAAGTACATGGCAATATCTGATACAAGACAAAGAAACATGCCTGCAATGAAAGATAGAGACACAGGGCAAGTACTAGCTTACCCTGAAGCAGTTCTATTAACCAACCCAATTAACCCACAATTTAGAGGAGAGGTGGATGATAAATATCAATACTCATGTGAAAACAAAGATAACACTGTTCATGGATGGATTAATTTTGGTTCTGATTCACCTGTGGGTTTCTGGATGATAACACCAAGTAATGAGTTTCGTAATGGTGGACCAATTAAGCAAGATCTTACTTCTCATGTTGGACCCATCACTCTTTCGATGTTTGTGAGCACACACTATGCTGGAAAGGAAGTAACCATGGCATTTCAAGAAGGAGAGACCTATAAAAAGGTTTTTGGGCCTGTATTTGTCTACCTTAATGCTGATTCAAGCAAGAATGATAATCTAACCCTTTGGTCAGATGCTGTGCAACAGTTATCCAAGGAGGTCCAAAGTTGGCCTTATGACTTTCCTCAATCACAAGATTATTTTCCACCTAACCAAAGGGGAGCAGTATTTGGAAGATTACTAGTCCAAGATTGGTACTTCGAAGGAGGAAGATTTCAATATGCTAATAATGCTTATGTGGGTCTAGCTTTGCCTGGAAATGCAGGATCATGGCAGAGAGAAAGCAAGGGCTATCAATTTTGGACTCGAGCTGATGCCAAGGGATACTTTAAAATAGCTAATGTTGTACCAGGTCACTATAATCTATATGGTTGGGTCTCTGGATTCATTGGTGATTACAAATATAATAGTACAATCACCATCACCCCAGGAGGAGTCATAAAATTAAATTCACTTGTATATAATCCCCCTAGAAATGGACCAACCATTTGGGAAATTGGTATTCCAGATCGTTTGACTTCAGAATTCCATGTACCAGAACCTTACCCTACTCTCATGAACAAATTATACACTGAAGGCAAAGACAATTTTAGGCAATATGGGTTGTGGGAACGTTACACTGAAATGTATCCAAATGATGATCTTATTTACACTGTCGGTGTTAACAAGAATAAAGATTGGTTTTATGCTCATGTTACAAGAAACACAGAAAATAATACATATGAACCAACAACATGGCAAATTATATTTGAACATCAGCATGACTTAATGAGTGGAAACTACACACTACAACTTGCCTTGGCCAGTGCTGCTGATGCTTACCTACAGGTTCGGTTCAATGATCGAAGCATATATCCACCCCACTTCGCGACAGGGCATATAGGAAGAATCCGAGGAGACAATTGCATACAAAGACATGGAATTCATGGATTGTATAGGTTGTTCAGCATTGATGTGCCAAGTAATCTTCTTTTGAAAGGAAAGAACATCATATATCTAACGCAGACCAATGCCGATACTCCTTTCCAAGGAGTTATGTATGATTATATCCGTTTAGAACGACCACCAGCAACGTGA 2076 0.3825 MMKMKVLSKKNNNVIFFWWFGMIVKLCFLLCVCADKTSLRGGSKKINSLKSTSTVKLNTEDQHQLVVDNGIVSVSMARPEGYILGISYNGIDNILDSENKELDRGYFDVVWNQPGEQNLSKSIFQRIHGTNFLVIAADDNMVEVSFSRLWTPSMSGTNVPINIDIRYIFRSGDSGFYSYAIFNRPKGMPGVEVDQIRFVFKLNKDRFKYMAISDTRQRNMPAMKDRDTGQVLAYPEAVLLTNPINPQFRGEVDDKYQYSCENKDNTVHGWINFGSDSPVGFWMITPSNEFRNGGPIKQDLTSHVGPITLSMFVSTHYAGKEVTMAFQEGETYKKVFGPVFVYLNADSSKNDNLTLWSDAVQQLSKEVQSWPYDFPQSQDYFPPNQRGAVFGRLLVQDWYFEGGRFQYANNAYVGLALPGNAGSWQRESKGYQFWTRADAKGYFKIANVVPGHYNLYGWVSGFIGDYKYNSTITITPGGVIKLNSLVYNPPRNGPTIWEIGIPDRLTSEFHVPEPYPTLMNKLYTEGKDNFRQYGLWERYTEMYPNDDLIYTVGVNKNKDWFYAHVTRNTENNTYEPTTWQIIFEHQHDLMSGNYTLQLALASAADAYLQVRFNDRSIYPPHFATGHIGRIRGDNCIQRHGIHGLYRLFSIDVPSNLLLKGKNIIYLTQTNADTPFQGVMYDYIRLERPPAT 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02484 691 CDD RGL4_N 58 351 - -
Mepo1g02484 691 SUPERFAMILY Galactose-binding domain-like 492 686 IPR008979 -
Mepo1g02484 691 Pfam Rhamnogalacturonate lyase family 51 252 IPR010325 -
Mepo1g02484 691 FunFam Rhamnogalacturonate lyase B 382 482 - -
Mepo1g02484 691 CDD RGL4_M 385 485 IPR029413 -
Mepo1g02484 691 SUPERFAMILY Starch-binding domain-like 381 484 IPR013784 GO:0030246
Mepo1g02484 691 Gene3D - 383 484 - -
Mepo1g02484 691 Gene3D - 492 686 - -
Mepo1g02484 691 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 56 689 - -
Mepo1g02484 691 CDD RGL4_C 497 686 - -
Mepo1g02484 691 Pfam Polysaccharide lyase family 4, domain III 495 685 IPR029411 -
Mepo1g02484 691 Pfam Polysaccharide lyase family 4, domain II 409 481 IPR029413 -
Mepo1g02484 691 SUPERFAMILY Galactose mutarotase-like 59 353 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mepo1g02484 691 Gene3D - 57 360 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02484 Mepo-Chr1 26042572 26049903 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02484 53 688 Polysaccharide Lyase AT1G09890 55.070 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02484 K18195 - gmx:100776664 1038.87