Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02481 ATGGCAATTTCACCAGAGTTGGAGCATCCCAGAAAGGCTTTTGGATTGGCAGCTAGGGACTCATCTGGAGTTCTCTCTCCCTTCAACTTCTCAAGAAGGGAAACTGGAGAGAAAGATGTAAGATTCAAAGTGCTATTTTGTGGTATATGTCACTCAGATCTTCACATGTTGAAGAATGAATGGGGTAATTCTGTTTACCCCGTAGTGCCTGGGCATGAGATCGTAGGCGAAGTAACAGAGGTGGGAAATAAGGTACAGAAATTCAAAGTTGGAGACAAGGTAGGTGTTGGGTGCATGGTTCAATCCTGCCACTCATGCCAAAGTTGCAACGAAAATCTCGAAAATTACTGTCCAAAAGTGATTCTCACATATGGTTCCAAGAATCTCGATGGCACTATCACATACGGAGGCTACTCCGACACAATGGTCGCCGACGAAAGCTTTGTGATCAGTATTCCAAATGGCCTACCTCTTGATGCTGCAGCTCCTCTCCTCTGCGCCGGGATCACAGTGTATAGCCCTTTGAAATATTATGGACTTGATAAACCTAACTTGCAATTAGGTGTGGTTGGTCTTGGTGGACTTGGTCATATGGCTGTGAAATTTGCTAAAGCTTTTGGTGCTAAGGTAACAGTGATTAGCACTTCTCCTAACAAAAAGAAGGAAGCTATTGAACTTCTTGGAGCTGACTCATTTGTTGTTAGCACTGAACAAGATCAAATGCAGGCTGCAACAGGCACCTTGGATGGTATCATTGACACAGTTTCTGCCACCCATCCTCTATTACATTTGATTGGTCTTTTGAAATCTCATGGAAAACTTGTTATGGTTGGTGCACCTGAGAAGCCTCTAGAGCTACCAGTATTTCCTTTACTTATGGGGAGAAAGATAATAGGAGGGAGTATGATTGGAGGAATTAAGGAGACACAAGAAATGATTGATTTTGCTGCCAAACACGACGTGAAACCTGAAATTGAAGTTGTTTCAGCTGATTATGTGAACACTGCATTGGAGCGTCTGCTTAAAGCAGATGTCAAATATCGATTTGTTATTGATATTGGGAATACATTGAAGAGCTCTTAA 1083 0.4247 MAISPELEHPRKAFGLAARDSSGVLSPFNFSRRETGEKDVRFKVLFCGICHSDLHMLKNEWGNSVYPVVPGHEIVGEVTEVGNKVQKFKVGDKVGVGCMVQSCHSCQSCNENLENYCPKVILTYGSKNLDGTITYGGYSDTMVADESFVISIPNGLPLDAAAPLLCAGITVYSPLKYYGLDKPNLQLGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIELLGADSFVVSTEQDQMQAATGTLDGIIDTVSATHPLLHLIGLLKSHGKLVMVGAPEKPLELPVFPLLMGRKIIGGSMIGGIKETQEMIDFAAKHDVKPEIEVVSADYVNTALERLLKADVKYRFVIDIGNTLKSS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02481 360 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Mepo1g02481 360 CDD CAD1 14 352 IPR047109 GO:0016616
Mepo1g02481 360 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0016616
Mepo1g02481 360 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Mepo1g02481 360 SUPERFAMILY GroES-like 20 183 IPR011032 -
Mepo1g02481 360 FunFam Uncharacterized protein 16 166 - -
Mepo1g02481 360 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Mepo1g02481 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Mepo1g02481 360 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Mepo1g02481 360 Gene3D - 17 353 - -
Mepo1g02481 360 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Mepo1g02481 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Mepo1g02481 360 Gene3D - 167 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02481 Mepo-Chr1 25992441 25995842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02481 11 358 Monolignol Biosynthesis Gene Families AT4G37990 74.425 2.76e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02481 K23232 - gmx:100809071 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01450 5 15182010 15183887 Mepo1g02481 1 25992441 25995842 PCT