Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02472 ATGGAGAGATTAAGGAATAAAAGGGATCAAGAAAAGAAAGAAAAGAGATGGAGAATGGTCGATATGATAACGGGTAATAACAATAATCCAAAGAAAGAGTTTGGTTTTGCAAATGAAAACAACAATGATTCACCAACAGCATCACCAAGAGGTGTATTTGAGGTACCAATTTCGGATTCCGACAGCACGGGGAGCAGCATCTACAGCAACAATGGAGGGAAACCATCATCACCAATGGAAGGGAACCAATGGAAGGCTATGATTGATGCATTGAGGTTTAAGTCTGCGAGGAGATTTTCTACCATTCCTTTGCTTGCTGCTAGCTATGAAATTTCTAGGAAGAATTTGAGGAACAAGTTGGCTCGTAAAAGAACAGCTAATGATGAAGATGAGAATTTTTTTGATGGTGCTTTTGATCTTGATGGTATTACAAAGCCTTCTTGGAGAAACTTTAGTTATGAAGATCTTGTTGCTGCAACCGACAATTTCAATCCTGAGAACATGATTGGAAAAGGTGGTCATGCAGAAGTGTACCAAGGACGCTTACCTGATGGAATGGTTGTAGCAGTAAAGAGGCTAATGAACAATGAGAAGGAAGCTGGAGACAGAGCTGCTGGTGATTTCTTGTCGGAGCTTGGGATTATTGCTCACATTAACCACCCAAATGCAGCACGTCTCATCGGTTTTGGAATTGATCGTGGCCTTTACTTTGTTCTTCAATTCGCTCCACATGGAAGCCTTTCCTCTTTGCTCTTTGGTTCTGAATGTTTGGCATGGAATATAAGGTTCAAGGTAGCAGTTGGGGTAGCCAAAGGTTTGCAATATCTCCATCAAGATTGTCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACAATGATGATGAAGCCGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCGGATAAATGGGCACACCATGTTGTATTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTCATGCATGGACTTGTGGATGAGAAGACTGATGTTTTTGCATTTGGGGTATTGCTACTTGAACTCTTGACAGGCCGTCGTGCGGTTGATTCAAATAGCAAGCAAAGTCTTGTGATTTGGGCTAAACCACTATTGGACGCAAAGCAAGTGAAAGAAATAGCAGACCCAAGATTAGGAGAGCAATATGATCCAACTGAAATTAAGCTAGTCATGGCAACAGCTTCCAGGTGTATCCATCACATGTCCTCTAAAAGACCATTCATGGATCAGGTTGTGCTACTACTAAAGGGAGAAGAGGTAGCAATGGACCTCACTCAAAAAACAATAGCTCCAAGGTCACTCTTGTTAGATACTTGTGATTTAGAAGACTATACTTGTTCTAATTATTTGAATGATCTCAATCGCCACAAGCAATTAATCATGGAGATATGA 1440 0.409 MERLRNKRDQEKKEKRWRMVDMITGNNNNPKKEFGFANENNNDSPTASPRGVFEVPISDSDSTGSSIYSNNGGKPSSPMEGNQWKAMIDALRFKSARRFSTIPLLAASYEISRKNLRNKLARKRTANDEDENFFDGAFDLDGITKPSWRNFSYEDLVAATDNFNPENMIGKGGHAEVYQGRLPDGMVVAVKRLMNNEKEAGDRAAGDFLSELGIIAHINHPNAARLIGFGIDRGLYFVLQFAPHGSLSSLLFGSECLAWNIRFKVAVGVAKGLQYLHQDCPRRIIHRDIKASNILLNNDDEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAFGVLLLELLTGRRAVDSNSKQSLVIWAKPLLDAKQVKEIADPRLGEQYDPTEIKLVMATASRCIHHMSSKRPFMDQVVLLLKGEEVAMDLTQKTIAPRSLLLDTCDLEDYTCSNYLNDLNRHKQLIMEI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02472 479 MobiDBLite consensus disorder prediction 1 20 - -
Mepo1g02472 479 Pfam Protein kinase domain 166 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02472 479 SMART serkin_6 163 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02472 479 Gene3D Phosphorylase Kinase; domain 1 139 239 - -
Mepo1g02472 479 MobiDBLite consensus disorder prediction 58 78 - -
Mepo1g02472 479 MobiDBLite consensus disorder prediction 1 81 - -
Mepo1g02472 479 MobiDBLite consensus disorder prediction 22 48 - -
Mepo1g02472 479 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 243 445 - -
Mepo1g02472 479 ProSiteProfiles Protein kinase domain profile. 163 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02472 479 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Mepo1g02472 479 Gene3D Transferase(Phosphotransferase) domain 1 243 446 - -
Mepo1g02472 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Mepo1g02472 479 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 139 241 - -
Mepo1g02472 479 PANTHER OS08G0249100 PROTEIN 34 442 IPR046958 -
Mepo1g02472 479 SUPERFAMILY Protein kinase-like (PK-like) 147 438 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02472 Mepo-Chr1 25791541 25795076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02472 147 454 Trihelix Transcription Factor Family AT5G38560 41.379 2.54e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo1g02472 PK_Tyr_Ser-Thr 2.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02472 - - tpra:123924518 758.059