Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02469 ATGGGAGAGTTTGTTGAGAAGAATCGGAATTCTGGTTTACTATATGATCTTAACTCAACTTTGGTGTTTTTCGGTGATGAACAAGAGCTTAACAAATCAATAGTTGAGTTTCAAGCTGTTCCGAGTTCTACTACTGTAAGCAAGTTAGGTGAATCTTCTAATGATGCTAATCAGAAATCCATTGTTGCGGTGGATTCTGATGCTTCCAAAAAAATTACTGTTCATGGCACTGGCCATCGCACTTCAGCTTACAGAGGAGTCACAAGGCACAGATGGACAGGTAGATTTGAAGCACATCTATGGGATAACAGCTGCAAACGTGAGGGTCAGAAAAGGAAAGGGCGTCAAGTGTACTTGGGTGGGTATGACAAGGAAGAAAAGGCAGCAAGGGCTTATGATTTGGCAGCACTGAAGTACTGGGGACCAACAGCTACCATAAACTTTCCAGTTTCCCATTATGCTAAGGAATTAGAGGAGATGAAAGATGTAGGAAAGCAAGAATTTGTTGCTTCACTGCGAAGGACAAGCACTGGTTTTTCGAGGGGAGCTTCCAAGTACAGGGGTGTTACAAGGCACCATCAACAGGACCGATGGCAAGCAAGAATTGGTCGAGTTGCTGGAAACAAAGATCTATACTTGGGAACATATGAAACTGAAGTGGAAGCAGCAGAGGCATACGACCTTGCAGCCATAAAGTTTAGAGGTGAAAATGCTGTAACCAATTTTGAGATAAGTAGATACAATACTGAGGATACCCTGGATAGCTCTTCTCCAGTTGGTGGGGAAGCAAAACGCTTAAAACCTTCCGAAGAATCAGAGAAGAAAGCTCCTGAGACTAGTACTACTGAACAACCTGAGGGTACAAATGTGAATAGCAGCATCAATTTTCTGCCAATTGATTCTGAACCTTATGATTCTGCAACACAAGATTTCATCCACAACCCTTTCCACCATTTTCATCCTTCTATCAATGCAGAAAGTGGCACAGCAGAGTCTGCTGCAACAACAACCAATGGTGCAGCTGAGTTCTTTCTTTGGCCCCGTCAGTCCCAGTGA 1056 0.4328 MGEFVEKNRNSGLLYDLNSTLVFFGDEQELNKSIVEFQAVPSSTTVSKLGESSNDANQKSIVAVDSDASKKITVHGTGHRTSAYRGVTRHRWTGRFEAHLWDNSCKREGQKRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTATINFPVSHYAKELEEMKDVGKQEFVASLRRTSTGFSRGASKYRGVTRHHQQDRWQARIGRVAGNKDLYLGTYETEVEAAEAYDLAAIKFRGENAVTNFEISRYNTEDTLDSSSPVGGEAKRLKPSEESEKKAPETSTTEQPEGTNVNSSINFLPIDSEPYDSATQDFIHNPFHHFHPSINAESGTAESAATTTNGAAEFFLWPRQSQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02469 351 CDD AP2 184 245 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 MobiDBLite consensus disorder prediction 281 299 - -
Mepo1g02469 351 Pfam AP2 domain 83 141 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 Pfam AP2 domain 184 235 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 FunFam AP2-like ethylene-responsive transcription factor ANT 82 151 - -
Mepo1g02469 351 MobiDBLite consensus disorder prediction 250 299 - -
Mepo1g02469 351 MobiDBLite consensus disorder prediction 264 280 - -
Mepo1g02469 351 SUPERFAMILY DNA-binding domain 184 245 IPR016177 GO:0003677
Mepo1g02469 351 SUPERFAMILY DNA-binding domain 82 151 IPR016177 GO:0003677
Mepo1g02469 351 ProSiteProfiles AP2/ERF domain profile. 185 243 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 CDD AP2 82 151 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 Gene3D AP2/ERF domain 184 245 IPR036955 GO:0003700|GO:0006355
Mepo1g02469 351 Gene3D AP2/ERF domain 83 151 IPR036955 GO:0003700|GO:0006355
Mepo1g02469 351 FunFam AP2-like ethylene-responsive transcription factor 184 245 - -
Mepo1g02469 351 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 PRINTS Ethylene responsive element binding protein signature 225 245 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 SMART rav1_2 83 155 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 SMART rav1_2 185 249 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 ProSiteProfiles AP2/ERF domain profile. 83 149 IPR001471 GO:0003700|GO:0006355
Mepo1g02469 351 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 52 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02469 Mepo-Chr1 25750902 25757300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02469 52 305 AP2-EREBP Transcription Factor Family AT5G57390 61.111 1.43e-111 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo1g02469 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02469 K09285 - gmx:100814405 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01478 5 15457825 15462801 Mepo1g02469 1 25750902 25757300 PCT