Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02467 ATGGATACAACTCAAATTGAAAAAATATATGTTGCAGTTGGCTATGATGTGTTAGATGGATTTCAAACATTGGATTGGGCTCTCAAGAAATGGAATTCTCATCCAAATATTTCTATAATCATTTTACATGTCAAATACAACTCTTGCAATGATCATGTTTATACCCTCCTTGGAAAACTCCCTGCAAAAGGTGCATGTGAAGAGACACTAGAACGTATAAGGAAATATGAGGAAACCATAATCAACAAGCTACTCTCCAAGTATATAGCTATATGTGACAAAATTCCAGCTGAAACATTTGAGGTTGAGAAATTTGATGAACCAATGCAGAACATCACTATAGACCTGATCTTTGGTCTCGGAATAACGAAATTGGTCATCGGATTTTCATTCATGAGACCTTCCTTGAAATCTAAAGATGCCATGAACGGATTATTCTATGTTCATCAGCACAAGCCAGATTTCTGTGAGTTATTCATTATCTGTGGAGGGAAACAAGTTTCACCAAGAGTGAAAAACGATGAGATAACCATGGAGGATGATAGTGGGGTCAAGGTTGCCAAAATGAGAGATAAGACAAGTTTTAAATATTGGATAGAAAGAATGTTTTGTGATAAAACCATTGATTCCAACCAAAGAAGTTCTAGCAGATCACCAACTACCTCAACAAGTTTGGAGTCTCATCTTGACCAAAATCAGTGGGAACTTTATATGCAAGAAATTGACAATTATTTACAAGAGTTAATGTCCTTAAATTTGGATGAAGGAAGTTTTGGACAAGACAATGATGATTCCTTCTTAAGTCCAATTGAGCCATATGTCCAACAACTTAAAAATTCCAATAATAAGAGTGCTGAAGAAAAATTGGAGATTGTCATTGATAAACTGAATGAAGCTTATAATACAATCCAAATGGAAAGAAAAGAAGAAAAGGACAATTTGGAGAGACATGCAAAAGCTGAATGGGCGATTTATATATGCAGTCGTCGGGAAGAAGAACTTGAATATCTAAAAAGTGAAGAAGTGACAAAAAGGGAAGAGCTAAAGAAGGAACTTAATGTAGAAAAAGATCAAATTTATTATATTAGAATGTATGTTGAAGAAAGCAAACAAAGGCTTAGCTCACTGCAAGATCTACAACTTGACCTAAAAAATAAACTTAATGTTTCTACATTGCAAGTTTCAGAATGTGAAACCAAACTAGAGAAACTAATGACTGAAAGGGCAAAGATGTTAATGGAGATAGATGAGTTAAGTAGACAAAGAGATGTGTTTAACAAAAGGATTAAATTTTTCAAAGAAAAAGATGCCACAGAAATGTGTAATAAACTAATAGAGAATGGTTGTAGTTTAAGAGAGTACACAAAGGAAGAGATCATAATGGCCAGTCACAATTTTTCAGAACACTTTAGGTTGAAATGTGGTGGGGATTGGAGTAATGTTTATAGAGGACACATTGATCATTCCAATGTTGCAATCAAGATGCTTCATTCTAATCTTGCCTTGTCCCAACATGATTTCCAAGCTAAGTTGAGGTCACTTGGTAGTATTCGACATCCTCATCTGGTTGCTATACTGGGATTCTGCTCTGAGCCCAAATGCTTAGTTTTGGAATACATGCAAAACGGCAGTTTGGAAGAAAAGCTACCTTGCAAGACAAGAAAAAACTCCATAAGCTGGCAAGATTGCATAAAGATAGCCATAGAAGTTTGTTCTGGGCTGGGCTTTCTGAACTCATTTCAGCCCAGGCCCATTACTCATTGTCATATTTCTCCATCCAACATCCTCCTAGACAACAATCTTGTTGCAAAGATTAAACTGTTTTGTCTTCATGAGTGCAATAAAGAATGTAATGTTGGATCAGATATGAAGGCAATAGGGGTTTTGTTGTTATATTTATTGACTGGAAGAGGAAATTGGATGACAATGGATATTGAGGCTTTTTTTGATGAGATTGGTGAAGAATGGCCATTGGACGTAGCAAGAGAACTATTGAGCTTAGCAATGAGATGCATGTGCATAAATTGTGAGTCCAATGAAGAAATGAGTATAACAAGTGTCATGGAGGAACTTAATGAGATCAAAAGAAAGGGTTGTGACTCCAATAAAGTGCCTAATGTTTTTCTATGTCCAATCCTTCAAAAGGTAATGAGAAATCCACACATAGCAGCAGATGGATTTTCTTATGAGCTAGAAGCAATAGAACAGTGGCTGCAATCTGGGAATGAACTATCACCCAAAAACTTGAGGCTGAAGAACACATTACTCTTCCCTAATCATAACCTCCGTTCCCTAATTCAGTTCTGGCAAGCAAGAAATCAGCTGAAGTTGTAA 2334 0.3603 MDTTQIEKIYVAVGYDVLDGFQTLDWALKKWNSHPNISIIILHVKYNSCNDHVYTLLGKLPAKGACEETLERIRKYEETIINKLLSKYIAICDKIPAETFEVEKFDEPMQNITIDLIFGLGITKLVIGFSFMRPSLKSKDAMNGLFYVHQHKPDFCELFIICGGKQVSPRVKNDEITMEDDSGVKVAKMRDKTSFKYWIERMFCDKTIDSNQRSSSRSPTTSTSLESHLDQNQWELYMQEIDNYLQELMSLNLDEGSFGQDNDDSFLSPIEPYVQQLKNSNNKSAEEKLEIVIDKLNEAYNTIQMERKEEKDNLERHAKAEWAIYICSRREEELEYLKSEEVTKREELKKELNVEKDQIYYIRMYVEESKQRLSSLQDLQLDLKNKLNVSTLQVSECETKLEKLMTERAKMLMEIDELSRQRDVFNKRIKFFKEKDATEMCNKLIENGCSLREYTKEEIIMASHNFSEHFRLKCGGDWSNVYRGHIDHSNVAIKMLHSNLALSQHDFQAKLRSLGSIRHPHLVAILGFCSEPKCLVLEYMQNGSLEEKLPCKTRKNSISWQDCIKIAIEVCSGLGFLNSFQPRPITHCHISPSNILLDNNLVAKIKLFCLHECNKECNVGSDMKAIGVLLLYLLTGRGNWMTMDIEAFFDEIGEEWPLDVARELLSLAMRCMCINCESNEEMSITSVMEELNEIKRKGCDSNKVPNVFLCPILQKVMRNPHIAADGFSYELEAIEQWLQSGNELSPKNLRLKNTLLFPNHNLRSLIQFWQARNQLKL 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02467 777 SUPERFAMILY RING/U-box 702 775 - -
Mepo1g02467 777 Coils Coil 338 358 - -
Mepo1g02467 777 PANTHER OS02G0152300 PROTEIN 9 767 - -
Mepo1g02467 777 Gene3D Phosphorylase Kinase; domain 1 436 539 - -
Mepo1g02467 777 ProSiteProfiles U-box domain profile. 703 776 IPR003613 GO:0004842|GO:0016567
Mepo1g02467 777 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 702 776 IPR013083 -
Mepo1g02467 777 Pfam Protein tyrosine and serine/threonine kinase 476 612 IPR001245 GO:0004672|GO:0006468
Mepo1g02467 777 Gene3D Transferase(Phosphotransferase) domain 1 546 701 - -
Mepo1g02467 777 SMART Ubox_2 707 769 IPR003613 GO:0004842|GO:0016567
Mepo1g02467 777 Coils Coil 366 386 - -
Mepo1g02467 777 CDD RING-Ubox_WDSUB1-like 705 759 - -
Mepo1g02467 777 Coils Coil 282 313 - -
Mepo1g02467 777 Pfam U-box domain 704 774 IPR003613 GO:0004842|GO:0016567
Mepo1g02467 777 ProSiteProfiles Protein kinase domain profile. 467 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02467 777 SUPERFAMILY Protein kinase-like (PK-like) 451 677 IPR011009 -
Mepo1g02467 777 Coils Coil 394 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02467 Mepo-Chr1 25734309 25737736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02467 4 772 U-box Gene Family AT5G65500 42.946 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mepo1g02467 PK_Tyr_Ser-Thr 3.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02467 - - gmx:100795815 1010.36