Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02445 ATGGAAGAGAACAATAACGTTGATTTATCACGCTTTATGTGCTTTGAAAACCCATCTATATGCTTTGAAAATTATGAAAGTAATGTTGATGACGAGTCTAGTCTTTCTTTTAAAAATCCATGTTTGAGTTATGACAACATTGGATCAGAAAAATTGTTGGCTTTTTCCGCATTTACAAATGAAACTGTTTTATCTTTGGTTAAGAGAGAAAGTGAACATTTACCTCGTGATGATTATCTTGAGAGGCTTCGTGGTGAGGACATAAACTTAAAATTTAGGGACTTAAACTTGAACATGAACTTGAACTTGAATGGTATTAGGAGGGAGGCTATTGAGTGGATGTGGAAGGCTACTGCATGTTATGGTTTTGGACCCTGTATTTTTTCTCTTGCTATGAACTACCTAGATCGTTTCCTATCTGCATACAAATTTGAAAGAGGCCATCTTTGGAGTGAGAAATTGTTGGCTTTAGCATGTTTGTCAATTGCTGCTAAGCTGGAGGAGGGAAAAAAATTGCCTAAATCTATGGACTTTAAGTTAGGAGAATCAATGTTTGTATTTGAAACTAAAGGCATTACAACAATGGAGCTATTGATATTAGACCACTTGAATTGGAAAATGAAATCTTCAACTCCATGCTCCTTTGTGGATTACTTCCTTAGTAAGATTACTTCTGAGCAGCAGTTTCCATCAGGATCGTCCATGTTGAATTCAATAGACCTTATTCTTAAGATGCCTAAATATGTTGATTTCTTGGAATTCAAGCCTTCTGAAATTGCTGCGGCAACTGCAATTTGTGTTTCAACGGAATTACAAACAAATGGGATTGATGAAGTCTTGACTCGTTTTGCTATTGTGGAGAAGGATAAAACTTTGAAGTGTCTTGAACTGATGAAAAATTTGGGCTGGATGGAAGTTTCTTCTGATTTAAGCAGCATCAACTTTGGAACAAGTGTACCTGAAAGCCCTGTTGGAGTGCTAGATTCTGCATGGCAGAGCTCTAAATGTGATGGAAAAACAATGGATGGATTATATCCAAATTCTTCTCCTGAAAGTTCACATGCAAGCAAGAGGCACAAGTCCTTCCATGACAATGAAGCTTTTCTAGTCATGAAATTTTAG 1122 0.3654 MEENNNVDLSRFMCFENPSICFENYESNVDDESSLSFKNPCLSYDNIGSEKLLAFSAFTNETVLSLVKRESEHLPRDDYLERLRGEDINLKFRDLNLNMNLNLNGIRREAIEWMWKATACYGFGPCIFSLAMNYLDRFLSAYKFERGHLWSEKLLALACLSIAAKLEEGKKLPKSMDFKLGESMFVFETKGITTMELLILDHLNWKMKSSTPCSFVDYFLSKITSEQQFPSGSSMLNSIDLILKMPKYVDFLEFKPSEIAAATAICVSTELQTNGIDEVLTRFAIVEKDKTLKCLELMKNLGWMEVSSDLSSINFGTSVPESPVGVLDSAWQSSKCDGKTMDGLYPNSSPESSHASKRHKSFHDNEAFLVMKF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02445 373 CDD CYCLIN_AtCycD-like_rpt2 211 298 - -
Mepo1g02445 373 SMART cyclin_7 112 201 IPR013763 -
Mepo1g02445 373 Pfam Cyclin, C-terminal domain 211 302 IPR004367 -
Mepo1g02445 373 PANTHER CYCLINS 63 300 IPR039361 -
Mepo1g02445 373 Gene3D - 104 208 - -
Mepo1g02445 373 SUPERFAMILY Cyclin-like 52 207 IPR036915 -
Mepo1g02445 373 FunFam D6-type cyclin 204 296 - -
Mepo1g02445 373 ProSitePatterns Cyclins signature. 107 138 IPR006671 -
Mepo1g02445 373 Gene3D - 209 296 - -
Mepo1g02445 373 Pfam Cyclin, N-terminal domain 101 207 IPR006671 -
Mepo1g02445 373 FunFam D6-type cyclin 92 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02445 Mepo-Chr1 25496944 25499397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02445 13 277 Core Cell Cycle Gene Families AT5G65420 42.105 7.46e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02445 K18810 - gmx:100800570 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01518 5 15856879 15859486 Mepo1g02445 1 25496944 25499397 PCT