Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02389 ATGGCACAGGATACCTCTGGAGTTGATTCACAACAAAAACATCTTGGTCGGTTAAAAGATCAAGTTCGATTGGTTAAAAGGAAAGACTGCGAACGCTATGAGGTTTCTCCAATCCAGAACAAACTATCATTTGAGAATGGTTTCTCTATAGTGTTTCATGCATGCCAATTGTTGGTCCAGAAAAATGATGGAATGATATTAATAGGGGTAGGGGGTCCTTCTGGGGCAGGGAAGACTGTGTTTGCTGAAAAGATATTCAACTCCATGCCTGATATTGCAGTCATTTCAATGGACAATTACAATGATTCTAGTCGCATTGTCGATGGAAACTTCGATGCAGATCCACGCTTAACAGATTACGAAACATTGCTCCGAAATGTTCATGATTTAAAGGCAGGAAAGCCAGTCCAAGTTCCCGTGTATGATTACAAATCCAGTTCACGTACAGGATACAGGACGGTTGAAGTTCCGAGCTCTCGAATTGTGATTATAGAGGGCATTTATGCTTTGAGTGAGAGGTTGCGGCCTCTACTAGACCTTCGAGTATCTGTAACAGGCGGTGTGCATCTTGACCTTATTAAACGAGTTATACGTGATATACAACGTGCTGGTCAAGAACCTCAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTATATTGAGCCAGATCTCCAAACTGCACACATAAAAATAAACAACAAGTTTAATCCATTTTTCGGATTCCAAAGCCCTACTTACATTTTAAAGTCAACCAGGAATGTAACAGTGGATCAAATCAAAGCTGTTCTCTCCCAAAATTTTGAGGAAACAACTGAGCAAACATATGACATATATCTTCTACCACCTGGTGAAAATCCAGAGAGCTGTCAATCATATTTACGGATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACTGAAGATCCATTTGTCATATCACCGAGAATTACTTTTGCGGTCAGTGTGCGTCTTCTTGGTGGACTGATGGCCCTTGGATACACAATAGCAACTATTCTTAAAAGAAGTAGCCATGTCTTATCTGATGATAGGATTTGTGTTAAACTAGATTGGCTTGAGCAACTAAATCGACATTATGTTCAGGTACAAGGAACGGATCGATTAGTTGTAAAAAACATAGCACAGCAATTGGGTTTGGAAGGTTCGTACGTTCCCCGTACCTACATTGAGCAGATTCAACTTGAAAAGTTTGTAATGGCCATGCCAGATGATTTAAGGACAAAACTCAACCTTCATGAAGATTTGGTGTCAAACCCCAAAGCAGCATTTTTAAGAACCTCTAGTGACCGGGTTCCCATGAGACATATACGTATGAGAAGTGATATATCGCAGTCAAGTACAAATCAAAAAGATGAGAATCAAGCAAAAGTAACTGGTTTTGTTTCAAACAATCGAGGATTTCTTAAAAGTAATCATTCAGATTCTGAAACGAAACAGGAAAATCAGGGAGCCATCACTCAGCTTTCAGAACAAATTTCATCGCTACATGATAGAATGGGCGAATTTACAAATCGTATTGAAGAGCTGAACTCAAAGTTAACCATCAAGAAAAATTGTCCAAGCCAACAAAATATGTCTTTGCAAGCTGAGTCCTTTGATGGTTCTGCTCCCACTTCTTATTTCATCACTAGTTTGAGCAACGGCTCCCTAAATGGACTCTCATCACAATTAGCTAAGGAATCACATTTAAGTGATGAGATATCAGGTATTGCACGGTGCCAGCGCCATATAATGAATCAGTTAGATAATTTGAACAATCTTTTTTGTGGAAATTTGGAAGAGAAGCCTCATCAAACAAGAAACAACTCGAAAAGTGTAGATTCTTCTTCAGATTCGGGTGGTCGTCATATAATGGTGGCAGTGGCTATTGGTTGTGGTTGTTTGGGAATCTTCTTAATGAAGGGTTTGTTAACCAGAAATTGA 1974 0.3931 MAQDTSGVDSQQKHLGRLKDQVRLVKRKDCERYEVSPIQNKLSFENGFSIVFHACQLLVQKNDGMILIGVGGPSGAGKTVFAEKIFNSMPDIAVISMDNYNDSSRIVDGNFDADPRLTDYETLLRNVHDLKAGKPVQVPVYDYKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHLDLIKRVIRDIQRAGQEPQEIIHQISETVYPMYKAYIEPDLQTAHIKINNKFNPFFGFQSPTYILKSTRNVTVDQIKAVLSQNFEETTEQTYDIYLLPPGENPESCQSYLRMRNKDGKYSLMFEEWVTEDPFVISPRITFAVSVRLLGGLMALGYTIATILKRSSHVLSDDRICVKLDWLEQLNRHYVQVQGTDRLVVKNIAQQLGLEGSYVPRTYIEQIQLEKFVMAMPDDLRTKLNLHEDLVSNPKAAFLRTSSDRVPMRHIRMRSDISQSSTNQKDENQAKVTGFVSNNRGFLKSNHSDSETKQENQGAITQLSEQISSLHDRMGEFTNRIEELNSKLTIKKNCPSQQNMSLQAESFDGSAPTSYFITSLSNGSLNGLSSQLAKESHLSDEISGIARCQRHIMNQLDNLNNLFCGNLEEKPHQTRNNSKSVDSSSDSGGRHIMVAVAIGCGCLGIFLMKGLLTRN 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02389 657 Pfam Phosphoribulokinase / Uridine kinase family 67 238 IPR006083 GO:0005524|GO:0016301
Mepo1g02389 657 Pfam CYTH domain 270 405 IPR023577 -
Mepo1g02389 657 Coils Coil 509 529 - -
Mepo1g02389 657 ProSiteProfiles CYTH domain profile. 249 411 IPR023577 -
Mepo1g02389 657 Gene3D - 65 272 IPR027417 -
Mepo1g02389 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 239 IPR027417 -
Mepo1g02389 657 PRINTS Uridine kinase signature 189 199 - -
Mepo1g02389 657 PRINTS Uridine kinase signature 65 82 - -
Mepo1g02389 657 PRINTS Uridine kinase signature 225 238 - -
Mepo1g02389 657 PRINTS Uridine kinase signature 133 148 - -
Mepo1g02389 657 CDD UMPK_like 67 240 - -
Mepo1g02389 657 PANTHER URIDINE KINASE 43 413 - -
Mepo1g02389 657 SUPERFAMILY CYTH-like phosphatases 261 408 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02389 Mepo-Chr1 24715356 24721053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02389 66 237 PRT Gene Family AT5G40870 28.177 7.45e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02389 K00876 - gmx:100781286 967.992