Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02352 ATGGCGATGCTATTGAGAAAACTATGCGATTCAGCATCATCATCCATAAAACGATCCACCAACACCAACACCAACACCAACACAAACTCCTCCTCCAATTCATCATCATCATCACGATCACACCATCATCATCATGCACTGAGTCCTTTGGGTTTATTTGACTCACTCCCTCCTGATATACTCCTCAAAATCACACGACTATTGGGACCTAAACATGCTGCCAAACTCTGCCTCGTTTGCAAGTCATGGCGATCTCTCGTCTCTGATAACGAACTCTGGGCTCATTTTCTTCAGACACACCAGCCTATACACTTTCACTCTATTCTCTTCTCGGAAACTAATTTAACTTCTGGTTACCCTCTTCCAATCTTTGATACTCAGACGACAACACCACACGTGTCGTTTAAGCATGTTTTTGGTCACCGGGAGCGACTTCCTCCCGCTGTTATCATCGACGGTGGTTCTGGATATTGCAAATTTGGTTGGAGCAAAGAGGACCGTCCATTGGGACGAATTGCTACCTTTTTGGAATTTGGTAATGTGGAAACGCCGATATATACTAGGCTTCGACATTTTTTTGCAACTGTCTATGGCAGGATGAAGGTGAAACCAAGTTCTCAAGCGGTTGTTGTTTCTTTGCCATTATGCCACTATGATGACACCGAATCAGCCAAAGCATCAAGACAGCAGCTTAAAGAAGCAATCTGTGCTGCTCTGTTTGACATGAATGTTCCTGCTGTTTGTGCTCTCAACCAGGCAACTTTGGCTCTGTATGCTGCAAATCAAACTTCTGGAATAGCTGTTAATATAGGCTTTCAAGTTACATCTGTAGTTCCAATTTTAAATGGTAAAGTGATGCGAAAGGTGGGTGTGGAGGTTGTTGGGCTTGGAGCATTAAAACTTACAGGATTTCTTAGAGAGAAAATGCAACAAAACAACTTATATTTTGAATCTTTATACACCGTTCGCACACTGAAAGAGAAGCTATGCTATGTTGCCTATGACTATGAAGCCGAGCTATTGAAGGATACACATGCATCATTTGAAGCCGTTGAAGGGAAGTTTACACTCTCAAAAGAGCGGTTTCAAACAGGAGAGATTTTGTTCCAGCCACGTCTTGCTGGGGTGCGAGCAATGAGTTTGCACCATGCCATAGCTCTCTGTATGGACCATTGTCATTCGGCAGAATTAGCAGGCAGCAGTGATTGGTTTAAGACCGTTGTCTTATCGGGAGGGTCTGCATGTTTACCAGGCTTATCAGAGAGGTTACAGAAGGAACTTCATTCATTACTTCCTCCTTATATGTCGAATGGAATCAGAGTCATCCCTCCTCCACACGGTGCAGATACGGCATGGTTTGGCGCAAAGCTTATTGGCAGTTTGAGTACCTTTCCTGCCCCCTGGTGCATAACAAAGAAGCAATTCCGTCAGAAGTCTAAACTCAACCGAATATGTAGCTTTGCTGATAAGAAGCCTTTATAG 1482 0.4366 MAMLLRKLCDSASSSIKRSTNTNTNTNTNSSSNSSSSSRSHHHHHALSPLGLFDSLPPDILLKITRLLGPKHAAKLCLVCKSWRSLVSDNELWAHFLQTHQPIHFHSILFSETNLTSGYPLPIFDTQTTTPHVSFKHVFGHRERLPPAVIIDGGSGYCKFGWSKEDRPLGRIATFLEFGNVETPIYTRLRHFFATVYGRMKVKPSSQAVVVSLPLCHYDDTESAKASRQQLKEAICAALFDMNVPAVCALNQATLALYAANQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNNLYFESLYTVRTLKEKLCYVAYDYEAELLKDTHASFEAVEGKFTLSKERFQTGEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGSSDWFKTVVLSGGSACLPGLSERLQKELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSLSTFPAPWCITKKQFRQKSKLNRICSFADKKPL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02352 493 SUPERFAMILY Actin-like ATPase domain 147 268 IPR043129 -
Mepo1g02352 493 Pfam F-box-like 54 96 IPR001810 GO:0005515
Mepo1g02352 493 Pfam Actin 222 476 IPR004000 -
Mepo1g02352 493 Gene3D Actin; Chain A, domain 4 296 378 - -
Mepo1g02352 493 SMART fbox_2 56 96 IPR001810 GO:0005515
Mepo1g02352 493 CDD NBD_sugar-kinase_HSP70_actin 149 293 - -
Mepo1g02352 493 SMART actin_3 146 486 IPR004000 -
Mepo1g02352 493 ProSiteProfiles F-box domain profile. 50 96 IPR001810 GO:0005515
Mepo1g02352 493 Gene3D - 192 477 - -
Mepo1g02352 493 MobiDBLite consensus disorder prediction 15 37 - -
Mepo1g02352 493 SUPERFAMILY Actin-like ATPase domain 263 476 IPR043129 -
Mepo1g02352 493 PANTHER ACTIN 189 479 IPR004000 -
Mepo1g02352 493 MobiDBLite consensus disorder prediction 15 43 - -
Mepo1g02352 493 Gene3D - 41 144 - -
Mepo1g02352 493 SUPERFAMILY F-box domain 42 107 IPR036047 GO:0005515
Mepo1g02352 493 Gene3D - 253 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02352 Mepo-Chr1 24258277 24263825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02352 195 485 Cytoskeleton Gene Families AT5G09810 32.131 2.71e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02352 K16616 - gmx:100804254 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02352 1 24258277 24263825 Mepo1g02352 1 24258277 24263825 ECH