Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02350 ATGGGGACACCGTGTTTTAGGGATTTTCTGACATTTGTCGAATGTTTTTTTATTGTCTTTGTTTCTTCTGATGCTTTGAGAATGGGTTTAAATATTAGATACGGTAGAGTTCACATTGATGACAAGGCTTTCTTTGCTAATGCAAAGATGAGTTCGTTCTCCATTACGAGGAAAAAGACGCCATTTCAGAAGCATAGAGAAGAGGAGGAGGCAAAGAAGAAGAGAGCGGAAGATGAGACTGCTCGCCTGTATGCTGAATTTGTAGAGTCATTTCAAGGGGACAACGCTCCCGGGTCAAAGACTTTTGTTCGAGGAGGAACAATTAATCCCAATGATAAATTGAAAGACGATTCTGAGGGTGAAAAGTCCAAAGAGGGGGTATCTGGTCCAAAGAAGGGAAGTAGATATGTACCATCTTTTATACCGCCTCCATTGGCAACCAAGGGGAAAGAATCTGAAAAGAAAAAAGAGGAAGAAAAGCCAAAGGAAAAAGAGAAAGGAAAGTCAAGGAACATTGATCATTTTATGGAGGAGCTCAAGCAAGAGCAAGAGATGAGGGAGAGACGAAATCAAGACCGTGAACAATGGCGTGATGGGCGTATTGGAGAGCATTCTATTTCCAGTCGTTTTGATGAACTACCTGACGATTTTGATCCAAGTGGAAAGCTTCCAGGATCATTTGATGATGGTGATCCACAAACTACAAATCTTTACGTTGGAAATCTCTCACCCCAGGTTGATGAAAACTTTCTTCTGCGCACTTTTGGAAGATTTGGACCTATTGCTAGTGTGAAGATAATGTGGCCTCGAACAGAGGAGGAGCGAAGGCGGCAAAGAAACTGTGGTTTTGTTGCATTCATGAACAGAGCTGATGGACAGGCTGCAAAAGACGAAATGCAAGGAGTCGTGGTTTATGAGTACGAATTGAAAATTGGATGGGGAAAGTCAGTTGCCCTCCCATCACAAGCATTACCTGCACCTCCACCAGGGCATATGGCCATCAGGAGTAAGGAGGGTAACACTGTTATCTTGTCTGGCCCATCAGGTCCACCAGTAACATCAGTGCCTAGTCAGAACTCTGAACTGGTTCTTACTCCTAATGTTCCTGATATAATGGTTACACCTCCTGAGGATGAACATCTAAAGCATGTAATTGATACAATGGCTCTGTATGTCTTGGACGGAGGATGTGCTTTTGAACAAGCTATTATGGAGAGGGGTCGTGGCAACCCTCTTTTCAATTTCTTGTTTGTTCTTGGCTCGAAGGAGCATACCTATTATGTTTGGAGGCTCTATTCATTTGCTCAGGGTGATACTCTTCAAAGATGGCGAACTGAACCTTTTATCATGATAACGGGTAGTGGAAGATGGATTCCTCCTGCATTACCGATAGCGAAAAGTCCAGAACATGACAAAGAATCTGGCTCCACACATGCTGCTGGAAGGAGCAGGCGTGCAGAACCTGAAAGAACCCTGACTGATGCACAGAGGGATGAGTTTGAGGATATGCTGCGTGCTTTAACATTAGAGAGGAGTCAGATAAAGGGGGTTATGGGGTTTTCTTTGGATAACGCCGATGCAGCTGGGGAGATAGTTGAAGTGTTGACGGAATCCTTGACACTTAAAGAAACCCCTATTCCTACTAAAATTGCAAGGCTTATGCTTGTCTCTGATATTCTTCATAATAGTAGTGCTCCTGTAAGAAATGCATCGGCTTATCGCACCAAGTTTGAAGCAACATTACCTGATGTAATGGAGAGTTTTAATGACTTGTATCGTAGCGTAATGGGGCGTATTACTGCTGAAGCCCTTAAGGAACGAGTACTGAAAGTTCTGCAAGTATGGGCCGATTGGTTTCTCTTTTCAGATGCTTATGTTAATGGCTTAAGAGCCACTTTCCTTAGACCTGGGAACTCAGGTGTAATACCATTCCACTCCATATGCGGTGACGCACCTGATATTGAGCAGAAGATCACTTCTGATGATGCTATTGTTGGTGGCAAGACCGACCAAGATGCTGCATTGGCAATGGGTCGAGGAGCTGCAACGAAAGAGCTAATGAGTCTTCCTCTTGCTGAGCTGGAAAGGCGGTGCCGACACAACGGATTGTCACTTGTTGGTGGTAGAGAAATGATGGTTGCTCGGTTGCTAAGTCTTGAAGAGGCAGAAAAGCAAAGAGGTTATGAACTAGATGATGGATTGAAATATCCCGGCAACCAAACAAGTTCAGGGAAAAATTCAAGTAGTCAGCGAGAAACAAGTGCAGATCCTGAACCAATGGGATTGTCTGGATTGAATCATTATGGGGATGAAGATTTGCAGTTGCAAGGCAAAGGCTATGCACCTTTAGCGCCAACCCTTCCTATTCCACAGCCTGAACTTAAAGCCTTCGCAAAAAAAGAGAAGAATGATCTGGTTCTGCCAGCCTCTAAATGGGCTCGGGAGGATGATGAGAGTGATGATGAGCAAGGGAAAGGTGGGAAAAATCTTGGGTTAAGCTACTCATCCTCTGGTAGTGAGAATGTGGGTGATGGCCTTATTAAAGCTGATGAATCAGAGGCTGCTGCTGATTCAAGTTTTCCAGCTCATGCTGACAGTGGAATGAATGAAGAGCAGAGACAAAAGTTGAGACGCTTGGAGGTTGCTTTAATTGAATATCGCGAGTCTCTTGAAGAAAGGGGGATTAAAAATTTGGAAGAAATTGAGAAGAAAGTTCTGATGCACCGGAAACGGCTGCAAGTGGAGTACGGGTTATCAGATTCTAATGAAGATGGTCAAGGCAGTAGGAAAACATCTTCAGAGAGGAGGGATAGGCATGATGTCTCAAGGAAACGGCACCGCAGCCATAGTCCAAGTCGTAGTCCACAACAGAAACCGTCAAGCAAAGACAGAGATAGAGAACGAGACAGAAAAAGAGATAAAAGTTATGATTTTGACAGTGATAGAGGAAGAGACAGGCTCAGGGAGAAGAGTGGAAGCAGGGAGAGGGGTGATCATGATAGGGATAGAGGCAGGGACAGAGACAGGAGAAGACGCGCCAAATAG 3045 0.4433 MGTPCFRDFLTFVECFFIVFVSSDALRMGLNIRYGRVHIDDKAFFANAKMSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTINPNDKLKDDSEGEKSKEGVSGPKKGSRYVPSFIPPPLATKGKESEKKKEEEKPKEKEKGKSRNIDHFMEELKQEQEMRERRNQDREQWRDGRIGEHSISSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGNTVILSGPSGPPVTSVPSQNSELVLTPNVPDIMVTPPEDEHLKHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFVLGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPALPIAKSPEHDKESGSTHAAGRSRRAEPERTLTDAQRDEFEDMLRALTLERSQIKGVMGFSLDNADAAGEIVEVLTESLTLKETPIPTKIARLMLVSDILHNSSAPVRNASAYRTKFEATLPDVMESFNDLYRSVMGRITAEALKERVLKVLQVWADWFLFSDAYVNGLRATFLRPGNSGVIPFHSICGDAPDIEQKITSDDAIVGGKTDQDAALAMGRGAATKELMSLPLAELERRCRHNGLSLVGGREMMVARLLSLEEAEKQRGYELDDGLKYPGNQTSSGKNSSSQRETSADPEPMGLSGLNHYGDEDLQLQGKGYAPLAPTLPIPQPELKAFAKKEKNDLVLPASKWAREDDESDDEQGKGGKNLGLSYSSSGSENVGDGLIKADESEAAADSSFPAHADSGMNEEQRQKLRRLEVALIEYRESLEERGIKNLEEIEKKVLMHRKRLQVEYGLSDSNEDGQGSRKTSSERRDRHDVSRKRHRSHSPSRSPQQKPSSKDRDRERDRKRDKSYDFDSDRGRDRLREKSGSRERGDHDRDRGRDRDRRRRAK 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02350 1014 Gene3D - 868 919 - -
Mepo1g02350 1014 Pfam CID domain 499 627 IPR006569 -
Mepo1g02350 1014 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 235 316 IPR000504 GO:0003723
Mepo1g02350 1014 SMART cwf21_2 868 917 IPR013170 -
Mepo1g02350 1014 CDD cwf21_RRC1-like 868 917 IPR047491 -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 110 129 - -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 808 825 - -
Mepo1g02350 1014 SMART surpneu2 382 436 IPR000061 GO:0003723|GO:0006396
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 60 77 - -
Mepo1g02350 1014 Coils Coil 66 86 - -
Mepo1g02350 1014 SMART rrm1_1 236 312 IPR000504 GO:0003723
Mepo1g02350 1014 SUPERFAMILY RNA-binding domain, RBD 228 323 IPR035979 GO:0003676
Mepo1g02350 1014 Gene3D - 492 638 IPR008942 -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 914 1014 - -
Mepo1g02350 1014 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 237 309 IPR000504 GO:0003723
Mepo1g02350 1014 Coils Coil 869 889 - -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 808 873 - -
Mepo1g02350 1014 Gene3D - 146 318 IPR012677 -
Mepo1g02350 1014 Gene3D Surp module 370 439 IPR035967 GO:0003723|GO:0006396
Mepo1g02350 1014 ProSiteProfiles SURP motif repeat profile. 384 427 IPR000061 GO:0003723|GO:0006396
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 736 756 - -
Mepo1g02350 1014 SUPERFAMILY ENTH/VHS domain 496 633 IPR008942 -
Mepo1g02350 1014 CDD RRM_SR140 234 317 IPR035009 -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 464 495 - -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 148 213 - -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 58 77 - -
Mepo1g02350 1014 PANTHER RNA PROCESSING PROTEIN LD23810P 49 954 - -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 95 213 - -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 958 1007 - -
Mepo1g02350 1014 ProSiteProfiles SAP motif profile. 686 720 IPR003034 -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 466 495 - -
Mepo1g02350 1014 MobiDBLite consensus disorder prediction 728 772 - -
Mepo1g02350 1014 Pfam Surp module 383 434 IPR000061 GO:0003723|GO:0006396
Mepo1g02350 1014 ProSiteProfiles CID domain profile. 492 637 IPR006569 -
Mepo1g02350 1014 SUPERFAMILY Surp module (SWAP domain) 357 439 IPR035967 GO:0003723|GO:0006396
Mepo1g02350 1014 SMART 558neu5 499 634 IPR006569 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02350 232 312 Eukaryotic Initiation Factors Gene Family AT1G71770 32.099 2.89e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02350 K12842 - gmx:100776093 1617.82