Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02348 ATGAGCAGCAACGACGTTGATAAAACGTTAAAAGAAAAGGAACCTAAGACGCCTCCAGCTGCTACGTCACAGTCTTCAACGACAACCGGCACTCCGGCAGTTAATCCAGAATGGGCTAACTATCAGGCATATCCTTCTATACCTCCACCTGGATTCATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATGATGCCTCCCTATGGCACCCCACCACATCCTTATGTCGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTATGCCATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGGAATACTCTAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTCAAATATGGTTACAAGAAAAAATAACGAGCTTGGTAAAACACCAGGGGCATCTGCTAATGGAATTCATTCCAAAAGTGGTGAGAGTGCAAGTGAAGGCACTAGTGAAGGAAGCGATGAAAACTCCCAGAATGGCTCTCAATTGAAATTCGGGGAGAGGCAGGATTCTTTTGAAGATGACCCATCTCAAAATGGCGGTTCAGTGCCTCAAAATGGCGCACTTAATACACCTCATACAGTTGTTAACCAAACTATGTCTGTCGTACCTATGTCTGTTGCTGGTCCTCTCACAACAGTTCCTGGTCCCACTACTAACTTAAACATAGGAATGGATTATTGGGGAACACCAACTTCATCCACCATTCCTGCAATGCACGGAAAGGTACCTTCTACTGCAGTTGCTGGAGGAATGGTTAATGCTGGGCCACGAGATGGTGTTCATTCACAACTTTGGCTACAGGATGAAAGGGAGCTTAAACGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCCGAATGTGATGAACTAGCTCAGCGTGCTGAGGTTTTGAATCAAGAAAATGCCTCTCTCCGTGCTGAACTGAGCCGGATCAAGAGTGAATACGAGAAGATACGTTCTGAGAATGCTTCCCTCAAGGAGAGACTCGGGGAGATACCAAGGAACGAGGATCTTGGGGAGGGCCAGAATGATCAGCATGTGGGTGAAGGCACTCAATAG 1188 0.468 MSSNDVDKTLKEKEPKTPPAATSQSSTTTGTPAVNPEWANYQAYPSIPPPGFMASSPQAHPYMWGVQHMMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPYAMPSPNGMVDASGNTLGSSEADGKPHEVKEKLPIKRSKGSLGSSNMVTRKNNELGKTPGASANGIHSKSGESASEGTSEGSDENSQNGSQLKFGERQDSFEDDPSQNGGSVPQNGALNTPHTVVNQTMSVVPMSVAGPLTTVPGPTTNLNIGMDYWGTPTSSTIPAMHGKVPSTAVAGGMVNAGPRDGVHSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNQENASLRAELSRIKSEYEKIRSENASLKERLGEIPRNEDLGEGQNDQHVGEGTQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02348 395 MobiDBLite consensus disorder prediction 1 15 - -
Mepo1g02348 395 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 305 368 IPR004827 GO:0003700|GO:0006355
Mepo1g02348 395 MobiDBLite consensus disorder prediction 143 199 - -
Mepo1g02348 395 Pfam bZIP transcription factor 303 365 IPR004827 GO:0003700|GO:0006355
Mepo1g02348 395 Coils Coil 323 371 - -
Mepo1g02348 395 Pfam Disordered region downstream of MFMR 135 270 - -
Mepo1g02348 395 MobiDBLite consensus disorder prediction 1 34 - -
Mepo1g02348 395 MobiDBLite consensus disorder prediction 18 34 - -
Mepo1g02348 395 MobiDBLite consensus disorder prediction 360 386 - -
Mepo1g02348 395 MobiDBLite consensus disorder prediction 208 224 - -
Mepo1g02348 395 SUPERFAMILY Leucine zipper domain 306 362 IPR046347 GO:0003700|GO:0006355
Mepo1g02348 395 CDD bZIP_plant_GBF1 308 358 IPR045314 GO:0003700|GO:0006355
Mepo1g02348 395 MobiDBLite consensus disorder prediction 304 327 - -
Mepo1g02348 395 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Mepo1g02348 395 MobiDBLite consensus disorder prediction 127 141 - -
Mepo1g02348 395 SMART brlzneu 303 367 IPR004827 GO:0003700|GO:0006355
Mepo1g02348 395 MobiDBLite consensus disorder prediction 360 395 - -
Mepo1g02348 395 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 310 325 IPR004827 GO:0003700|GO:0006355
Mepo1g02348 395 Gene3D - 306 360 - -
Mepo1g02348 395 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Mepo1g02348 395 MobiDBLite consensus disorder prediction 113 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02348 Mepo-Chr1 24219961 24226445 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02348 1 381 bZIP Transcription Factor Family AT2G35530 64.359 5.58e-166 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo1g02348 MFMR_assoc 2.3e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02348 K09060 - gmx:100101912 589.726