Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02338 ATGCATTATGGGATTGAGGTTAGGGTTATTCGTGGGATGAAGTATGAAGGGAGTGCATCTACTTCTAGTAAGGTTTATGTTTACGATGGATTGTATAAGATTGTTAGTTGCCAGTTTGATCTAGGGAAGTCTGGTTTTGGAGTTTATAAGTACAAGTTATTGAGAATTGAGGAGCAGACAAAGATGGGTAGCACTGTTCTCAAAGATGCTAGGGATATTAAGAAAATTGGGTTGGATTTCATGCCTATGAGTTGTCTCTCTGTTGATATTTCAAATAATAGGAAAAATGTTCCAGTTAGGCTATTTAATGATATAGATGTCAATCAAGAACCTCTTTATTATGAGTATCTTCCGAATACTACTTTCCCGTGGTTTGTGTTTCATCAGAGTGGGGAAGCTAATGGTTGTGGATGTAAGGAAGCTTGCACTGACGGTTGCTTTTGCGCTATGAAGAATGGAGGAGAGTTTCCCTATAATCTACATGGATTGCTTGTGAAAGGGAAACCTTTGATATTTGAATGCAGCCCTTTTTGCTCATGTCCTCCTAATTGTCGAAACCGTGTTGCACAAAAGGGGATCAAATATAGCTTGGAAGTGTTTAGGTCTACACAGACAGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAGGCTGGATCATTTATCTGCGAGTCTACTGGCGTTGCTATGACTAGGGAACAAGCTCAAATTTTAACAATGAATGGGGACTCGTTAGTATATCCTAGTGGATTTCCAAATAGATGGGTAGAATGGGGTGATTTATCTCAGATATAA 792 0.3939 MHYGIEVRVIRGMKYEGSASTSSKVYVYDGLYKIVSCQFDLGKSGFGVYKYKLLRIEEQTKMGSTVLKDARDIKKIGLDFMPMSCLSVDISNNRKNVPVRLFNDIDVNQEPLYYEYLPNTTFPWFVFHQSGEANGCGCKEACTDGCFCAMKNGGEFPYNLHGLLVKGKPLIFECSPFCSCPPNCRNRVAQKGIKYSLEVFRSTQTGWGVRSLDLIQAGSFICESTGVAMTREQAQILTMNGDSLVYPSGFPNRWVEWGDLSQI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02338 263 ProSiteProfiles YDG domain profile. 1 55 IPR003105 -
Mepo1g02338 263 PANTHER G9A, ISOFORM B 59 262 IPR043550 GO:0002039|GO:0016279|GO:0042054
Mepo1g02338 263 SMART preset_2 87 179 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g02338 263 SUPERFAMILY PUA domain-like 2 67 IPR015947 -
Mepo1g02338 263 Gene3D SET domain 65 263 IPR046341 -
Mepo1g02338 263 SUPERFAMILY SET domain 80 238 IPR046341 -
Mepo1g02338 263 Gene3D - 1 64 IPR036987 -
Mepo1g02338 263 ProSiteProfiles Pre-SET domain profile. 134 192 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g02338 263 Pfam SAD/SRA domain 1 59 IPR003105 -
Mepo1g02338 263 Pfam Pre-SET motif 90 187 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g02338 263 SMART G9a_1 1 59 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02338 Mepo-Chr1 24115422 24116213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02338 7 242 Su(var)3-9 homologs AT5G04940 40.000 8.88e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02338 K11420 - tpra:123924427 446.432