Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02318 ATGATGGAGTCATCGAGTGGAAGAGAGTTTTGTGCAAATGGAACCTCCATGGATACGGCGGAGGTTGAGGCTAAACTCGATCAAGGAAATATTCAAGATGCTGAAACTGCATTGCGTGATGGCTTGTCTCTTACTTCTGAGGAAGCACAAGCTCTACTCGGAAAATTAGAGTATCAAAGAGGTAATGTTGAAGGTGCTCTTCGTGTATTTGATGGAATTGATCTTAAAGCAGCTATACAGCGACTGCAACCTTCACTTTTGGAAAAGCCACCCGTCAAGAAAGGTCCCTCTCGTGGTGAATCACCTTCTTCAGTAACTCAGCATGCTGCTAGTATGGTGCTTGAAGCCATCTACCTAAAAGCCAAGTCTCTACAAAAACTGGGGAAATTTGATGAAGCTGCTAATGAATGCAAGCAAGTTCTTGATGCTGTTGAGAAGGTATTTTGTCAGGGTATATCTGATACTCAAGTTGACAATAAATTGCAGGAGATAGTAAGCTGTGCAGTAGAGCTCCTTCCCGAGCTTTGGAAACAGGCCGGTTGCTACGATGAGGCAATAACTACTTATAGGAACGCTCTTCTAAGTCAATGGAATCTTGATAATGATTGCTGTGCGAGAATTCAGAAAGCATTCGCCGTATTTTTGCTATACAGTGGTGTGGAGGCAAGTCCACCAAGTTTATCCGTTCAGATCGAGGGGTCTTATGTACCTAAGAATAATCTTGAAGAGGCAATTCTTCTTCTTATGATTGTTTTGAGGAAGTTTAGCCTAGGTAAAATAAAATATGATCCTTCAGTTATGGAACACCTAACTTTTGCACTCTCAGCATGTGGCGAAACTTCTATTTTGGCGAAGCAATTTGAAGAGATGCTTCCTGGTGTATATCATCGCATTGACCGTTGGAATTCTTTAGCTCTATGTCTTAGTGGAGCTGGACAAAATAAAAGTGCTTTGAATCTGCTACGGAAGTCTTTGCACAAACATGAACGACCAGATGACTTGGTAGCATTATTATTGGCTGCGAGGATTTGCAGTGAGGATTCTCATCTTGCTGCTGAGGGTGCAGGGTATGCTCAGAGGGCAATCGATAAAGCTCAGGGCTTAAACGAGCATTTGAAAGGTGTTGGTCTTCGGATGCTCGGACTCTGTCTTGGAAAGCAAGCTAAGGTTGCTTCCTCCGATTTCGAGAGGTCCATGCTTCAGTCAAAAGCTTTGCAATCATTGGAGGGGGCAGTTAGATTAGAGCAAAACAATTTTGATCTAATTTTTGAACTGGCAATTCAATATGCCGAGCACCGAAATTTGGCGGTTGCTTTACGTTATGCCAAGCAGTTCTTCGACAAAACTGGTGGCTCTAAATTGAAAGGATGGAGATTGCTTTCTCTGGTTTTGTCTGCACAGAAAAGATTTACAGAGGCCGAAGTGGTAACTGATGCTGCTATAGATGAGACCTCGAAATGGGAGCAGGGGCCTTTGTTCAGGATAAAAGCCAAGCTGAAGATCGCTGAATTAAGACCAATGGATGCTATTGAGATTTACCGGTACCTTCTTGCACTAGTTCAAGCCCAGAAGAAATCTGTTGGAACTCAAAGACTTAGTTCACAGGACGAGGAGGATCAAATAAATGAGTTTGATGTTTGGCATGGTCTAGCAAATTTATATGCAAGCCTTTCACATTGGAAGGATGCTGAAATCTGTTTGCAAAAGGCTAGAGAGTTGAAGGAATACTCGGCAGCAACAATGCAAACTGAAGGCAAGAACAAAACCTTTATGCTCTTAAATGTCTTATACTTTAGCATGTTCAACTTATATTTTCCCACATGTGTTGTATTTGAAGGTCGTGGACAAAGCGGTGAAGCTCTTGCAGCTTCTATCAATGCTATCCTAGTTGAACCAAACCATGTTCCAAGCAAGGTCTTGATGGGTTCTTTGATGCTGAAAAATGGTATCAAAGCATCACCTGTTTCTAGGAGTTTACTTTCCGATGCACTTAGAATAGAACCAACTAATCGCAATGCTTGGTATCATCTCGGATTAACTCACAAGGAAGATGGTCGAATGGGTGATGCTGCTGATTGCTTCCAGGCAGCTTCAATGCTTGAAGAATCTGATCCCATTGAAAGTTTTAGCTTTATGCTTTGA 2142 0.422 MMESSSGREFCANGTSMDTAEVEAKLDQGNIQDAETALRDGLSLTSEEAQALLGKLEYQRGNVEGALRVFDGIDLKAAIQRLQPSLLEKPPVKKGPSRGESPSSVTQHAASMVLEAIYLKAKSLQKLGKFDEAANECKQVLDAVEKVFCQGISDTQVDNKLQEIVSCAVELLPELWKQAGCYDEAITTYRNALLSQWNLDNDCCARIQKAFAVFLLYSGVEASPPSLSVQIEGSYVPKNNLEEAILLLMIVLRKFSLGKIKYDPSVMEHLTFALSACGETSILAKQFEEMLPGVYHRIDRWNSLALCLSGAGQNKSALNLLRKSLHKHERPDDLVALLLAARICSEDSHLAAEGAGYAQRAIDKAQGLNEHLKGVGLRMLGLCLGKQAKVASSDFERSMLQSKALQSLEGAVRLEQNNFDLIFELAIQYAEHRNLAVALRYAKQFFDKTGGSKLKGWRLLSLVLSAQKRFTEAEVVTDAAIDETSKWEQGPLFRIKAKLKIAELRPMDAIEIYRYLLALVQAQKKSVGTQRLSSQDEEDQINEFDVWHGLANLYASLSHWKDAEICLQKARELKEYSAATMQTEGKNKTFMLLNVLYFSMFNLYFPTCVVFEGRGQSGEALAASINAILVEPNHVPSKVLMGSLMLKNGIKASPVSRSLLSDALRIEPTNRNAWYHLGLTHKEDGRMGDAADCFQAASMLEESDPIESFSFML 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02318 713 Gene3D Tetratricopeptide repeat domain 603 711 IPR011990 GO:0005515
Mepo1g02318 713 Gene3D Tetratricopeptide repeat domain 174 583 IPR011990 GO:0005515
Mepo1g02318 713 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Mepo1g02318 713 PANTHER PROTEIN NPG1 3 710 IPR043376 -
Mepo1g02318 713 Pfam Tetratricopeptide repeat 21 71 - -
Mepo1g02318 713 SUPERFAMILY TPR-like 402 701 IPR011990 GO:0005515
Mepo1g02318 713 Gene3D Tetratricopeptide repeat domain 20 147 IPR011990 GO:0005515
Mepo1g02318 713 SUPERFAMILY TPR-like 114 439 IPR011990 GO:0005515
Mepo1g02318 713 MobiDBLite consensus disorder prediction 86 105 - -
Mepo1g02318 713 SMART tpr_5 671 704 IPR019734 GO:0005515
Mepo1g02318 713 SMART tpr_5 298 331 IPR019734 GO:0005515
Mepo1g02318 713 SMART tpr_5 544 577 IPR019734 GO:0005515
Mepo1g02318 713 SMART tpr_5 114 147 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02318 Mepo-Chr1 23902408 23907456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02318 8 713 Calmodulin-binding Proteins AT2G43040 68.310 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02318 K21843 - gmx:100811897 1117.45