Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02316 ATGCCCCGTGCTGCTAGTATTCCTAAAAAGCTTGCTCCAACTATTGGCATTGCTGTTGATCATCGCCGCAAGAACCGTTCTTTGGAAAGTCTGCAAACTAACGTGCAGAGGTTGAAAACGTACAAGGCCAAATTGGCCGTGTTCCCAAAACAGGCTCGCAAGGTCAAGGCTGGCGATTCTAGTCCCGAGGAACGTGCAAATGCCACACAAGTTCAGGGTACATACTTGCCCATTGTGAGGGAGAAGCCATCTGTTGAACTTGTTAAGGTTACCGATGAAATGAAAGCTTTCAAAGCTTATTATAAGCTTCGTCATGAACGCACTTATCAACGCCATCTTGGTGCTAGACTAAAGAGAGCCGCTGAAGCAGAAAAGGAAGAAAAAAAGTAG 390 0.459 MPRAASIPKKLAPTIGIAVDHRRKNRSLESLQTNVQRLKTYKAKLAVFPKQARKVKAGDSSPEERANATQVQGTYLPIVREKPSVELVKVTDEMKAFKAYYKLRHERTYQRHLGARLKRAAEAEKEEKK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02316 129 FunFam 60S ribosomal protein L13 88 129 - -
Mepo1g02316 129 PANTHER 60S RIBOSOMAL PROTEIN L13 3 129 IPR001380 GO:0003735|GO:0005840|GO:0006412
Mepo1g02316 129 Coils Coil 114 129 - -
Mepo1g02316 129 Gene3D - 89 129 - -
Mepo1g02316 129 Pfam Ribosomal protein L13e 3 107 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02316 Mepo-Chr1 23892737 23894239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02316 3 114 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 79.464 2.22e-61 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02316 K02873 - gmx:100805957 190.66