Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02314 ATGGCTGATGATGGTGATTATCAACCTTTGCTCGGTACCAAATTTGGTGTGATACTAATTGCCATGGGTTCAGCTAGCTTTGTGGTTACAATATACCATCTCATATTCATTTGCTGCAAACACGCATCCGAACAAGCGCGGCAGCATGAGCAACCGGCGACACAAACACCGAGCACTGAAGAGGGAAGTTTGGTGTCACATCAGATTCCATCCTACAAGTATGAGAAGAATAAAAAGAATGATGATAATGATGATGATTGTGTGACTTGTGCTGTGTGCTTAGCAGACTTTGAGGAAGGTGAGGAGTTGAGGACTATGCCTTCTTGCATGCACTCTTTCCATGTACCATGCATTGATATGTGGCTCCTTTCACATCTCAATTGTCCTGTTTGCCGCACAGATGCCACGCCCTCCCCGGTGGTTCCCCAATGTTTACCGGAGGTTAGGTCCGCCGAGGTGAATGTTGATCATGGCGTAAATACGGTGCAGATAGTTGTCACCCAAAACGAGTTGCAAAATGGGTTACACATGGTCCGATCCTAG 543 0.4641 MADDGDYQPLLGTKFGVILIAMGSASFVVTIYHLIFICCKHASEQARQHEQPATQTPSTEEGSLVSHQIPSYKYEKNKKNDDNDDDCVTCAVCLADFEEGEELRTMPSCMHSFHVPCIDMWLLSHLNCPVCRTDATPSPVVPQCLPEVRSAEVNVDHGVNTVQIVVTQNELQNGLHMVRS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02314 180 CDD RING-H2_EL5-like 90 132 - -
Mepo1g02314 180 SMART ring_2 90 131 IPR001841 -
Mepo1g02314 180 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 15 135 IPR044675 -
Mepo1g02314 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 139 IPR013083 -
Mepo1g02314 180 SUPERFAMILY RING/U-box 70 138 - -
Mepo1g02314 180 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Mepo1g02314 180 Pfam Ring finger domain 89 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02314 Mepo-Chr1 23879933 23880475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02314 17 162 C3H Transcription Factor Family AT5G17600 36.970 1.38e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02314 - - lja:Lj0g3v0111029.1 177.563