Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02310 ATGTCTGGTACACTTCCACTTTGTCTTTATAATATGTCATCTCTTACTCTGATTGCTGTTGACATGAACCAATTTAATAGCTCTCTTCCACCAAAAATGTTCCACACCCTTCCCAATCTCCAAATACTTTTCATGGCTACGAATCAATTCTCAGGTCCAATCCCGACTTCCATCACAAATACGTCTGTCCTAAGATCATTTGATATCCCTCAAAACCATTTCACGGGTCAAGTTCCAAGTCCTGGGAAGCTAAAAGATCTTCACCACCTAGGTTTGTCTCAAAACAATCTTGGAAGCAACTCAACTCAAGATTTGGAGTTTGTAAAGTCATTAGTAAATTGCAGTAAGTTGAATGAGGTTGATATATCCTACAATAATTTTGGAGGTCCTTTACCTGATTCCGTGGGAAATATGTCCAACAAACTCCATCAACTATATCTTGGGGGCAATCATATATTAGGAAAAATTCCTGCGGCATTAGGAAATCTAGTTAATCTATATCTCTTGGCCATGGAAAATAACTCTTTTGAAGGGATTATTCCTGCTAGTTTTGGGAAGTTTCAGAAGATGCAAATGTTAGAATTTAGTGGAAACCGGTTATCAGGAAATATACCAGCCTTTATAGGAAAACTCAATCATTTGTTTCATTTGGGTTTAGGACATAATAGGTTAGAAGGAAATATTCCCCTAAGCATAGGAAACAACCAAAAGCTAGATTACTTAGACCTATCACAAAACAAACTTACAGGAACCATACCCAAAGAACTTTTTAGTACTCTCTTCTCATTAAGAGAACTGTTAGACTTGTCGGGAAACTCATTGAATGGCAGTCTACCGCAAGAAGTGGGCAGGCTAGAAAATATCGAAATTTTGAATTTCTCTGATAATCATCTGTCTGGTGATATTCCTGGAATCATTGGGAAATGCGAAAGCTTGGAGTACCTTTATTTGCAAGGAAATTCCTTCAATGGAGTCATACCAACCTCTTTGGCTTCACTGAAAGGTGTGGTACCAACTGAAGGCGTCTTTGAAAATGCAAGTGAGGTGGCAGTAATTGGAAACAATGACCTTTGTGGAGGCATTTCAAAACTGCACCTACCTCCATGTCCATTAAAAGGAAAGGAACATTCAAAACATCATGATTTCAAGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTTTTATACTTCTATTAATTCTAACTATCTACTGTATACGGAAAAGAAACAAAAAACCTTCTTCTAATTCACCGACAATTGACCTTCTGGTTAAAATTTCATATGAAGACTTGTATAAGGGAACCGATGGATTCTCAACAAGAAACTTGATAGGAACAGGACATTTTGGCTCTGTCTATTTAGGAACTCTCGAGTTAGAGAATAAATTTGTAGCCATAAAGGTTCTGAAACTTCAAAAGAAGGGTGGTCATAAAAGTTTCGTTGTTGAATGTAATGCATTCAAAAATATTAGACATCGAAATTTGGTGAAGATATTATCATGTTGTTCCAGTACAGATTTCAAAGGTCAAGAATTTAAAGCTCTTGTTTTTGAGTACATGAAAAATGGAAGTTTGGAAAGTTGGTTGCATCCAGCAAAAGAAATTGCAGGTCCACAAAAAGCATTGAACCTTGCGCAAAGGTTAAATATTATTGTTGATGTTGCTTCAGCTTTTCATTATCTTCATCACGAATGTGAGCAACCTGTCATTCATTGCGATTTAAAGCCTAGCAATGTTCTTCTTGATGATTATATGGTAGCTCATGTGAGTGATATTGGTATAGCAAAACTGCTACCAACTATTGGAGTTTCCTTAATGCAAAATAGCAGCAGTGTAGGAATAAAGGGGACAATTGGTTATGCTCCTCCAGAGTATGAAATGTGTTCTATGTTGTCAATTGAAGGAGACATGTATAGCTTTGGAATTCTGGTTTTAGAAATGTTAACTGGAAGAAGACCTACAGATAAAATGTAG 1977 0.3657 MSGTLPLCLYNMSSLTLIAVDMNQFNSSLPPKMFHTLPNLQILFMATNQFSGPIPTSITNTSVLRSFDIPQNHFTGQVPSPGKLKDLHHLGLSQNNLGSNSTQDLEFVKSLVNCSKLNEVDISYNNFGGPLPDSVGNMSNKLHQLYLGGNHILGKIPAALGNLVNLYLLAMENNSFEGIIPASFGKFQKMQMLEFSGNRLSGNIPAFIGKLNHLFHLGLGHNRLEGNIPLSIGNNQKLDYLDLSQNKLTGTIPKELFSTLFSLRELLDLSGNSLNGSLPQEVGRLENIEILNFSDNHLSGDIPGIIGKCESLEYLYLQGNSFNGVIPTSLASLKGVVPTEGVFENASEVAVIGNNDLCGGISKLHLPPCPLKGKEHSKHHDFKLIAVIVSVVSFLFILLLILTIYCIRKRNKKPSSNSPTIDLLVKISYEDLYKGTDGFSTRNLIGTGHFGSVYLGTLELENKFVAIKVLKLQKKGGHKSFVVECNAFKNIRHRNLVKILSCCSSTDFKGQEFKALVFEYMKNGSLESWLHPAKEIAGPQKALNLAQRLNIIVDVASAFHYLHHECEQPVIHCDLKPSNVLLDDYMVAHVSDIGIAKLLPTIGVSLMQNSSSVGIKGTIGYAPPEYEMCSMLSIEGDMYSFGILVLEMLTGRRPTDKM 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02310 658 Gene3D Ribonuclease Inhibitor 1 370 IPR032675 -
Mepo1g02310 658 SMART serkin_6 439 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02310 658 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 110 336 - -
Mepo1g02310 658 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Mepo1g02310 658 ProSiteProfiles Protein kinase domain profile. 439 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02310 658 FunFam LRR receptor-like serine/threonine-protein kinase EFR 410 520 - -
Mepo1g02310 658 SUPERFAMILY Protein kinase-like (PK-like) 412 656 IPR011009 -
Mepo1g02310 658 Gene3D Phosphorylase Kinase; domain 1 403 520 - -
Mepo1g02310 658 PANTHER OS04G0122200 PROTEIN 332 656 - -
Mepo1g02310 658 ProSitePatterns Protein kinases ATP-binding region signature. 445 468 IPR017441 GO:0005524
Mepo1g02310 658 Pfam Protein kinase domain 441 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02310 658 SUPERFAMILY RNI-like 4 331 - -
Mepo1g02310 658 Gene3D Transferase(Phosphotransferase) domain 1 521 658 - -
Mepo1g02310 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02310 Mepo-Chr1 23848033 23850256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02310 2 658 Receptor kinase-like Gene Family AT3G47570 45.597 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo1g02310 Pkinase 7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02310 - - aprc:113870110 717.227