Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02305 ATGGGTTCCAATAGTAGCAAAGCCACTAGGAAGAGTAGTTCTAAAGGAATAGAAGGGTTTCATTCTCATTGTCTTGGAACATGTTCTGGATCTCAAGACAGTGATAATGAGGAACAGAATAAAGTAAATGGCAGTGATGTTACATATGCTGATAATGGCAATCTATCTTACCCAGATGAGGTGAAATCAAAGTCTTTTAGAAAGGTTAAAGCTGGTGACAGTGACAATACTTGCAGCTCTAGCCACGCTTCTTCAACTAATTTGTTGAATCCTACTAGTCGATTCCTTTCTCGGTTTGGCATCACTCCTGGTAATAAAAGCTCCAGACTTAGCATATTTACTGGTTCAAAGTCATTGAGGCCTTGTCCTGTTTCTTCTACAAGACTCTCAATATTTGACAATGATGTTGAGCATAATCTACATCCAGGACCTTGTAGCAGTTTAATTAACATAAATGAAACAGCACGGTGTCATGAAGATACTCCTATTAATATAAGGTCAAATGCCTCAGGATCAGGTTTGCCTTGCATTGGTGGCATTGGTGCAAGAGATGAGTTGGAGATAAACTTATTTTCTCCGAGAATTCAAACGGAGACAGAACATACCGAGACTAGACATTTAGATCGGCGAAACGGAGCTCGAGAACAAGTTGAAGAGAACGTTCGTTTTAGTCGAACTTTAAGTGTTGGAAGACTTCGTGACAGAGTCCTTCGTCGATCAACATTATCTGACGTTACCTTTTTCCCTCTGCAACAAGAGAGAGAACTGAGAGACGATATTCAGAATACTCTAAGGCAAACAGTGGAGGCAGATTCAAGAGTGTCACCATCGGATCATAGTGCTATTAGTTCTTCTACATCCAGATATCCTCTATCTAGCATGTCTAACTCCTTGTTTAGCAATCAAAACTATCGTGTTGAGACCTCACAATTGCGAGAAGGTAGGTATGAAAATTTCCTTGAACGGAGAAGAAGAATACGGTCACAGGTCCGTTCTCTTCAGAGGTTGGGTAGCCGGTATGAAAATCAATCTGCACATGAGAGATCATGTATCTTGTCAGGTCAACATAGAAGTGCTCGTTGTATGTGTCGATTCAGAAACCGTGACTCTAATTCAAATGATGACACTGGTGCTAGAGCTAGCATATCTAGAATTGTTGTACTTGCAGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTGGTTTTATCTTCCCATCCGTCTGTATCTTCTATTGGATCTGTTCCCGCACCTATCAATGTTGTGGAGTCATTGCCTATCAAGGTATTTGAGAAGTTGCATAAGCATCAAGAAGATGCTACACAATGCTATATATGCCTTGTGGAGTATAAGGATGGAGACAGCGTGCGAGTTCTGCCTTGCAATCATGAATTTCATAGAACATGCATAGACAAATGGTTGAAGGAGATTCACAGGGTATGCCCACTATGTCGGGGGAACGTCTGCATTTCTGACTCACCTCCAACTCGGAACTTTAGTGATGATGATTGTGCATTTTGTATTTCAGATGTTGATATTCCAACATAG 1557 0.4085 MGSNSSKATRKSSSKGIEGFHSHCLGTCSGSQDSDNEEQNKVNGSDVTYADNGNLSYPDEVKSKSFRKVKAGDSDNTCSSSHASSTNLLNPTSRFLSRFGITPGNKSSRLSIFTGSKSLRPCPVSSTRLSIFDNDVEHNLHPGPCSSLININETARCHEDTPINIRSNASGSGLPCIGGIGARDELEINLFSPRIQTETEHTETRHLDRRNGAREQVEENVRFSRTLSVGRLRDRVLRRSTLSDVTFFPLQQERELRDDIQNTLRQTVEADSRVSPSDHSAISSSTSRYPLSSMSNSLFSNQNYRVETSQLREGRYENFLERRRRIRSQVRSLQRLGSRYENQSAHERSCILSGQHRSARCMCRFRNRDSNSNDDTGARASISRIVVLAEALFEVLDEIHQQSVVLSSHPSVSSIGSVPAPINVVESLPIKVFEKLHKHQEDATQCYICLVEYKDGDSVRVLPCNHEFHRTCIDKWLKEIHRVCPLCRGNVCISDSPPTRNFSDDDCAFCISDVDIPT 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02305 518 Pfam Ring finger domain 445 488 IPR001841 -
Mepo1g02305 518 FunFam Putative RING zinc finger domain superfamily protein 415 493 - -
Mepo1g02305 518 Coils Coil 316 336 - -
Mepo1g02305 518 MobiDBLite consensus disorder prediction 28 52 - -
Mepo1g02305 518 MobiDBLite consensus disorder prediction 28 61 - -
Mepo1g02305 518 ProSiteProfiles Zinc finger RING-type profile. 446 488 IPR001841 -
Mepo1g02305 518 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 500 - -
Mepo1g02305 518 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 411 493 IPR013083 -
Mepo1g02305 518 SUPERFAMILY RING/U-box 425 494 - -
Mepo1g02305 518 SMART ring_2 446 487 IPR001841 -
Mepo1g02305 518 MobiDBLite consensus disorder prediction 268 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02305 Mepo-Chr1 23802748 23806845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02305 189 495 C3H Transcription Factor Family AT5G45290 56.698 9.19e-100 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02305 - - cam:101492704 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02305 1 23802748 23806845 Mepo1g02305 1 23802748 23806845 ECH
Mepo5g01210 5 12301247 12305878 Mepo1g02305 1 23802748 23806845 PCT