Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02304 ATGGAAAAGAAGAAGGCGGCAATTTACATTGATGATGAGTATGATGTTTTTTTATTTGGAGTATTTGATGGCCATGGAGGTGCAAAAGCCGCTGAATTTGCGGCAAATAACATAGAAAAGAACATCTTGGACGAAGTTATCATGAGCGGCGAAGATGATGTTGAGGAGGCAGTGAAACGCGGTTACCTCAATATTGATTCTGATTTCATGAAAAAAGATCTCCCTGGTAGCTCTTGTTGTGTAACAACATTGATTAGGAATGGTAACTTAGTTGTGTCTAACTCCGGTGATTGTCGTGCTGTTATTAGTGGAGGAGGATTTGATGAGGCACTAACATCTTATCACTGA 348 0.3994 MEKKKAAIYIDDEYDVFLFGVFDGHGGAKAAEFAANNIEKNILDEVIMSGEDDVEEAVKRGYLNIDSDFMKKDLPGSSCCVTTLIRNGNLVVSNSGDCRAVISGGGFDEALTSYH 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02304 115 Pfam Protein phosphatase 2C 13 115 IPR001932 -
Mepo1g02304 115 Gene3D - 1 115 IPR036457 -
Mepo1g02304 115 SUPERFAMILY PP2C-like 13 115 IPR036457 -
Mepo1g02304 115 ProSitePatterns PPM-type phosphatase domain signature. 18 26 IPR000222 GO:0043169
Mepo1g02304 115 CDD PP2Cc 12 115 IPR001932 -
Mepo1g02304 115 PANTHER PROTEIN PHOSPHATASE 2C 11 115 IPR015655 GO:0004722|GO:0006470
Mepo1g02304 115 ProSiteProfiles PPM-type phosphatase domain profile. 1 115 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02304 Mepo-Chr1 23772858 23773205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02304 18 115 PP2C-type Phosphatase Gene Family AT1G07160 64.000 1.45e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02304 K17506 - pvu:PHAVU_008G259800g 169.088