Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02280 ATGCCTTACCCATGTCTAAAGAAGCAAAAAGTGTTCAAACTGAATAAGAACTTTCTGTTAGAATCTTTAATCAGTAAAAGTTCACATGGGGCTTATCATGGAAATGATACACTCTCAATGCCTGCCTCAGATAGGATGATTCAGTTGCAGCCTAATTTTGATAGATTTTTCAATGATCATGATGGTAATATGGCAATGCCTCCTACGCCTTTTCTACAACAAAATAATTACAAGAGGAAAGATAAACTCCGTCAGCCTCTCACCGAGAGTGATTTACCAGGACATGTTTATTTGAACAAGAAGAGTGGATGGCCAACTCCATCACCTAGTATGTTCGTTATTCTGTTGGTCGTCGTTTCACACTACTGCTATCTCGTGGTAAAGGGGATAAAGTATAAGTACATACCAAAGGATAATAATAGAGAAGTATCAATGAATTTTAATGAAGGTGTTGATGGAGAAATAATTGGCCAAGGAAGGACGAATGGTACCACTTTCGTGTATGGAAGGTATGATGGTCAACCAGTTGCAGTCAAGCGGCTTCTCAAATCTCGTCATAGTCTAGCTCTAAACGAAATCAGAACGCTTGTGTCGGACCATCATCCGAACATTGTCAAATGGCATGGGGTGGAGTACGATGAAGATTTTATTTACCTTGCACTGGAGCTTTGGGTTGTTCATTTGCATAAACTAGGAATAATACACGGAAATTTGAAACCTCAAAATGTTCTAATAATCAAGGATAGATCCTTATGTGTAAAGCTTTCTGACATGGGCATTAACCAACATGTTCCTGACATGTCTGGTTTCGCCAAATCCTACTGTACAGGTTGGCAAGCCCCAGAGCAGGAACAAGGAATGGAAACACGAGCTGTAGACATATTCAGTTTAGGTTGTATTCTTTTTTTCTGTTTGACTAAGGGAAGTCATCCATTTGGAGATGATCATCGTTGGCGTAATTTCAATATCTTGAAGGATCAAAAAGATCTTTCCTTAGTGGAGTTCATTCCGGAAGCTGAGGATCTTATTAGCTGTTTATTAAACCCTGACCAGAATCTAAGGCCGAGCGCGGTTGAAGTATTGTAG 1086 0.3959 MPYPCLKKQKVFKLNKNFLLESLISKSSHGAYHGNDTLSMPASDRMIQLQPNFDRFFNDHDGNMAMPPTPFLQQNNYKRKDKLRQPLTESDLPGHVYLNKKSGWPTPSPSMFVILLVVVSHYCYLVVKGIKYKYIPKDNNREVSMNFNEGVDGEIIGQGRTNGTTFVYGRYDGQPVAVKRLLKSRHSLALNEIRTLVSDHHPNIVKWHGVEYDEDFIYLALELWVVHLHKLGIIHGNLKPQNVLIIKDRSLCVKLSDMGINQHVPDMSGFAKSYCTGWQAPEQEQGMETRAVDIFSLGCILFFCLTKGSHPFGDDHRWRNFNILKDQKDLSLVEFIPEAEDLISCLLNPDQNLRPSAVEVL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02280 361 PANTHER IRE1-RELATED 148 361 IPR045133 GO:0004521|GO:0004674|GO:0030968
Mepo1g02280 361 Pfam Protein kinase domain 226 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02280 361 ProSiteProfiles Protein kinase domain profile. 150 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02280 361 Gene3D Phosphorylase Kinase; domain 1 137 219 - -
Mepo1g02280 361 SUPERFAMILY Protein kinase-like (PK-like) 153 361 IPR011009 -
Mepo1g02280 361 Gene3D Transferase(Phosphotransferase) domain 1 220 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02280 Mepo-Chr1 23454778 23457196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02280 153 314 CBL-interacting serine-threonine protein kinases AT2G30360 30.918 5.73e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Mepo1g02280 Pkinase 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02280 K08852 - gmx:100785363 218.394