Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02261 ATGATACTCATCGATGACCAAACTCAAAGGAGGTATACGTGTCGCTTGATTACCGCGGATAGAGCCAGTCATGAAGAGTACTTGGGTGGCCAATGGTTCAACTTTTGCCAAGAACAGGAGTTAGAGGAACTCTTAACTCTCAAAGAGAAGATGGGTACCGTGAGCACAGCTCTAACAGAAGAAGCGCTTTCAGATAGTCTTAAAAGAAGTATCTATCAGTCTGTGCCTTCAGATGATGTTGCTGACTATGTTAATGTGGATAAGGATGATATCAAATGCTGCATTTGCCAGGTGTTTGCACTCCTGGTAGCAGCAAGTGTCCCAAAGGGGCATGTACTTGATTGA 345 0.4406 MILIDDQTQRRYTCRLITADRASHEEYLGGQWFNFCQEQELEELLTLKEKMGTVSTALTEEALSDSLKRSIYQSVPSDDVADYVNVDKDDIKCCICQVFALLVAASVPKGHVLD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02261 114 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 42 97 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02261 Mepo-Chr1 23261881 23263471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02261 42 97 C3H Transcription Factor Family AT2G15530 39.286 1.42e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02261 - - tpra:123907431 90.5077