Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02258 ATGACTAGAATATTACAATCCATTTCCTCCGCCGCACCACCACCGGACTCCGCCGCCTCATTAGAATCCGACTTCGTTGTCATCCTCGCCGCTCTCCTCTGCGCTCTAATCTCCGTTGTGGGTCTCACCGCAATCGCCCGCTGCGCCTGGCTCCGCCGTACACCCGTCGCCGGAGCCTCACCGGCGACGGCGGTGGCCAACAAAGGTCTCAAAAAGAAGGTACTCAATTCACTTCCGAAATTCACTTACCTCGACGACACTCCCGGAAAATGGGTTGTCTCATCGGAGTGCGCCATTTGTATCTCGGAGTTCACCGCCGGTGAAGAGGTTCGTGTACTTCCTCAGTGTGGTCATGGCTTCCACGTGGCATGTGTTGACACGTGGCTTGGGTCTCACTCTTCCTGCCCTTCTTGCCGTGCTCCGTTTGCCGTTGCTAGGTGTCAGAAATGTGGGCTGTATCAACCGACGGCTGCCGGAGAAGTTGCCGATGAAACGGAACAGAAATCTGCCGGCGGCGAGAATGTAGAAGTTGTTGTTGTTAATGCTAACTGTAATGGTAATAGTAACAGTGTTGATAGGCATAGTCACAATGTTAATAATGGCTTCTTGCCTTAA 615 0.5317 MTRILQSISSAAPPPDSAASLESDFVVILAALLCALISVVGLTAIARCAWLRRTPVAGASPATAVANKGLKKKVLNSLPKFTYLDDTPGKWVVSSECAICISEFTAGEEVRVLPQCGHGFHVACVDTWLGSHSSCPSCRAPFAVARCQKCGLYQPTAAGEVADETEQKSAGGENVEVVVVNANCNGNSNSVDRHSHNVNNGFLP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02258 204 Pfam Ring finger domain 96 139 IPR001841 -
Mepo1g02258 204 CDD RING-H2_EL5-like 96 139 - -
Mepo1g02258 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 144 IPR013083 -
Mepo1g02258 204 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 12 151 - -
Mepo1g02258 204 SMART ring_2 97 138 IPR001841 -
Mepo1g02258 204 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Mepo1g02258 204 SUPERFAMILY RING/U-box 76 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02258 Mepo-Chr1 23244412 23245398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02258 1 150 C3H Transcription Factor Family AT1G20823 59.006 1.80e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02258 - - vun:114170353 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01122 5 11322640 11323669 Mepo1g02258 1 23244412 23245398 PCT