Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02252 ATGATTAGAGTCTGGTTTGTGGTGTTGATGGTTCTCTACAATTTGATGTTCTCTTCAACTGTGGCTGGCTTGGATAATTCCACAGTACCTCCATTTGTAAATATTGGAGTACTCTACTCTTTCAATACTAGTGTTGGTAGAATGGTGAAAATTGCAGTAGAAGCTGCGGTTGCAGATATAAATTCTGATCCTACTATTCTTGGTAATACTAAGTTGAACCTCTCAATGCAAGAAGATTCAAAATATAGAGGCTTTTTGAGCATTGCTGAGGCGTTGCAGCTCATGGCGACACAGACTGTGGCGATTATCGGTCCTCAGACGTCTACGACAGCTCATGTCATATCTCATATAGCAAATGAGCTCCAGGTTCCTTTGCTATCATTTACAGCCACTGATCCGACTCTTTCTTCGCTTCAATTCCCGTTCTTTGTGAGAACTTCTTTCAATGACATTTTTCAAATGACTGCAATAGCAGACATTGTTAGCCACTATGGTTGGAGAGAGGTTATCACAGTCTATGGTGATGACGACCATGGGAGGAATGGAATTAGTGCGTTGGGGGATAAGCTTGCTGAGAGGCGTTGCAAGATCTCGTTTAAAGCTGCAATGACTCCTGATGCAACGAGTGAGGAGATTACCGATGTGCTAGTTCAGGTTGCCCTGGCAGAATCTCGGATTATTGTTCTACACACAAGTACTGCTTGGGGTCCAAAGGTGTTGAGTGTGGCGAAGTCTCTTGGAATGTTGCAAAATGGTTATGTCTGGATTGCTACTACTTTTCTCACATCTTATATTGACATAGATAGTCCTCTCTCTTCAGATGAAATGGATAACATTCAAGGAGTTCTAACACTAAGAATGTACATACCGGATTCTAAGCTCAAAAGATCGTTCATTTCTCGGTGGACCAATTTGACTAGTGGAAAAACTGCAAATGGTCCTCTTGGTTTAAGTACTTATGGTATCTTTGCATATGATACTGTTCATGTGCTTGCCCGTGCCCTTGATACATTTCTGAAACAAGGAAACCAAATTACATTTTCAAACGATCCAAAGTTAAATAAACCACGTGGAGACAGCTTGCATCTTGACGCTGTGAAAATTTTCAATGAGGGGGATCTGTTACGTAAAAGTATATATGAGGTTAACATGACTGGCGTAACAGGTCCATTCAGGTATACACCTGATGGAAACCTTGCAAATCCAGCATATGAGATCATCAATGTGATCGGAACAGGGACTCGCAGGGTCGGTTATTGGTCTAATTACTCTGGATTATCAGTTATTCCTCCAGAAACACTTTATTCAAAACCGCCTAATCGTTCCATTGATACTCAAAAGCTACTCACGGTCTTTTGGCCAGGAGAAACAACCCAGAGACCACGAGGTTGGGTTTTTCCAAACAATGGAAAGCTGTTAAAAATCGGAGTACCTAGAAGGTCTAGTTACCGTGAATTTGTTTCTCAGGTACAATCCACTGACACGTTCAAGGGATTCTGCATTGATGTATTTCTTTCCGCAGTAAACTTGTTGCCTTATGCTGTCCCCTATAAGTTTGTTCCATATGGTGATGGTCAAAACAACCCTAGTAATACTGAGCTTGTGCGTCTGATCACTGCCGGTGTCTTTGATGCTGCAGTAGGTGACATCACAATTACTACAGAGAGAACAAAGATGGTGGATTTTACTCAGCCATATATTGAGTCTGGCCTAGTGGTAGTAGCATCGGTTAAGAAGACGGATTCAAATGCTTGGGCATTTTTGACACCATTTACACCAATGATGTGGACTGTAACAGCTATCTTTTTCCTACTAGTGGGAGCTGTTGTTTGGATTCTAGAGCATAGACTGAATGATGATTTTAGAGGACCTCCTAAAAAACAAGTAGCGACAATTTTGTGGTTTAGCTTTTCAACGATGTTCTTCGCTCACAGGGAAAATACTGTGAGCACTCTTGGTCGTTTTGTCCTGCTTATATGGCTATTTGTAGTTCTAATAATTAACTCGAGTTACACAGCAAGCCTGACTTCAATCCTCACAGTGCAACAACTTTCTTCACCTATTAAAGGCATTGAAAGTTTAGTAAATAGCAAAGAGCCTATTGGTTACTTGCAGGGTTCTTTTTCCCGGTCTTATTTGATTGACGAAATCGGTATTCATGAATCGAGATTAGTTCCTATGAAAACACCTGAAGAAACTATGAAGGCACTAGAGAAAGGTCACCAGAACGGTGGTATTGCTGCATATGTTGATGAGCGTGCTTACATAGAGCTCTTCCTTTCTAGCCGGTGTGATTTTAGTATTGTAGGTCAAGAGTTTACCAGAAATGGTTGGGGATTTGCCTTTCCACCAGACTCGCCATTAGCAGTTGACCTGTCAACTGCCATTTTGGAGTTGGCAGAAAGTGGAGATTTACAAAGGATCCATGACAAATGGCTCTTGAGCAGTGCTTGTAGATCACAAGGTGCAAAGCTTGAAGTGGACAGACTCAATCTCAAAAGCTTTTGGGGCCTTTACCTAGTTTGTGGTTTGGCATGTTTCCTTGCTCTCCTGGTATATTTTATTCAGACCGTGAGACAGTACAAGAAGCACAGTCCAGACGAACTAGAGTCTTCTGGCCAAGGTTCAGGATCTTCGCGTCTGCGGACGTTTCTTTCATTTGTAGATGAAAAAGAAGTGATAGTTAAGAGCCGCTCGAAGAGAAGGCAAATGGATAGAAGCACAAGTGAGGTTGGATCAAACATCACCTCCAATAAAGATTTTTCTCGGTCATCAACATCGTTAAACAGAATTGATTCTCCTAATATAGTCTGA 2814 0.4158 MIRVWFVVLMVLYNLMFSSTVAGLDNSTVPPFVNIGVLYSFNTSVGRMVKIAVEAAVADINSDPTILGNTKLNLSMQEDSKYRGFLSIAEALQLMATQTVAIIGPQTSTTAHVISHIANELQVPLLSFTATDPTLSSLQFPFFVRTSFNDIFQMTAIADIVSHYGWREVITVYGDDDHGRNGISALGDKLAERRCKISFKAAMTPDATSEEITDVLVQVALAESRIIVLHTSTAWGPKVLSVAKSLGMLQNGYVWIATTFLTSYIDIDSPLSSDEMDNIQGVLTLRMYIPDSKLKRSFISRWTNLTSGKTANGPLGLSTYGIFAYDTVHVLARALDTFLKQGNQITFSNDPKLNKPRGDSLHLDAVKIFNEGDLLRKSIYEVNMTGVTGPFRYTPDGNLANPAYEIINVIGTGTRRVGYWSNYSGLSVIPPETLYSKPPNRSIDTQKLLTVFWPGETTQRPRGWVFPNNGKLLKIGVPRRSSYREFVSQVQSTDTFKGFCIDVFLSAVNLLPYAVPYKFVPYGDGQNNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVASVKKTDSNAWAFLTPFTPMMWTVTAIFFLLVGAVVWILEHRLNDDFRGPPKKQVATILWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKEPIGYLQGSFSRSYLIDEIGIHESRLVPMKTPEETMKALEKGHQNGGIAAYVDERAYIELFLSSRCDFSIVGQEFTRNGWGFAFPPDSPLAVDLSTAILELAESGDLQRIHDKWLLSSACRSQGAKLEVDRLNLKSFWGLYLVCGLACFLALLVYFIQTVRQYKKHSPDELESSGQGSGSSRLRTFLSFVDEKEVIVKSRSKRRQMDRSTSEVGSNITSNKDFSRSSTSLNRIDSPNIV 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02252 937 CDD PBP1_GABAb_receptor_plant 34 430 IPR044440 -
Mepo1g02252 937 Pfam Bacterial extracellular solute-binding proteins, family 3 493 813 IPR001638 -
Mepo1g02252 937 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 891 IPR015683 -
Mepo1g02252 937 Pfam Ligand-gated ion channel 814 846 IPR001320 GO:0015276|GO:0016020
Mepo1g02252 937 FunFam Glutamate receptor 584 714 - -
Mepo1g02252 937 Gene3D - 738 820 - -
Mepo1g02252 937 Gene3D - 472 583 - -
Mepo1g02252 937 PIRSF IGluLR_plant 1 935 IPR017103 -
Mepo1g02252 937 CDD GluR_Plant 471 813 - -
Mepo1g02252 937 Gene3D - 149 426 - -
Mepo1g02252 937 SUPERFAMILY Periplasmic binding protein-like II 448 815 - -
Mepo1g02252 937 MobiDBLite consensus disorder prediction 898 937 - -
Mepo1g02252 937 Pfam Receptor family ligand binding region 50 411 IPR001828 -
Mepo1g02252 937 FunFam Glutamate receptor 710 817 - -
Mepo1g02252 937 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
Mepo1g02252 937 FunFam Glutamate receptor 149 303 - -
Mepo1g02252 937 SUPERFAMILY Periplasmic binding protein-like I 29 465 IPR028082 -
Mepo1g02252 937 FunFam Glutamate receptor 468 584 - -
Mepo1g02252 937 Gene3D - 584 710 - -
Mepo1g02252 937 Gene3D - 51 401 - -
Mepo1g02252 937 MobiDBLite consensus disorder prediction 908 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02252 Mepo-Chr1 23153930 23158457 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02252 5 914 Ion Channels AT3G51480 58.643 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02252 K05387 - gmx:100788917 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02252 1 23153930 23158457 Mepo1g02252 1 23153930 23158457 ECH
Mepo1g02252 1 23153930 23158457 Mepo5g01113 5 11137633 11142271 ECH
Mepo5g01113 5 11137633 11142271 Mepo1g02252 1 23153930 23158457 PCT