Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02247 ATGTCTTGTTCTTCTTCATCTGGGTCTGAAGATGATGATGAGGGCTTTGATTCCTACCGGAAAGGTGGCTATCACGCTGTCCGGGTCGGTGATCAGTTCGCCGGTGGAAGGTATATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTTTCAACCGTTTGGCTTGCTTTTGATACTACCAACGATACATATGTTGCTCTCAAGATCCAGAAAAGTGCAGCACAGTTTGTTCAGGCTGCTCTTCACGAGATAGATGTTCTTTCGTCCATTGCTGATGGCGCCCCTTCAAATTCAAAATTTGTTGTCCAATTGATCGACCACTTTAAGCACACAGGTCCTAACGGCCAGCACCAATGCATGGTACTCGAGTTTCTTGGAGATAGCTTGCTACGTCTAGTCAGATACAACCGTTACAAAGGTCTTCCGATGAATAAAGTCAGGGAGATTTGTCGATGCATTTTGATTGGTTTGGATTACTTGCATAGGGAACATGGTATTATACACACAGACCTAAAACTTGAAAATGTTCTTCTGGTTTCTACTATCGATCCGGCGAAAGACCCTGTTAGATCGGGAGTCTCCCCAATTTTAGAGAGGCCCGAGGGAAACATAAACGGCGCGGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCGGTAGCTAAAATTTCTGGACAAAGAGGTTCTATGGGAGGAATGGGAGAAGCTCCAAATTCTGATAGAAATATTGATGGGATTGATGTTAGATGCAAAGTGGTTGATTTTGGAAATGCGTGTTGGGCTGATAAGCCATTTGCGGAAGAAATTCAGACACGACAGTATAGAGCTCCTGAAGTTATACTGCAGGCTGGTTATTCCTTCTCCGTCGATATGTGGTCTTTTGCTTGTATTGCTTTCGAGCTTGCCACTGGGGATATGTTATTTACTCCCAAAGTCGGACAAGGTTTTAGCGAGGACGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGCTACCGCAGGAGTGAAATCCAAGGATTTCTTCGACAGACACGGGGATCTCAAAAGGATTCGGAGGCTAAAATTTTGGCCTCTTAACAAACTATTGATTGAAAGATACAAATTATCAGAGAGTGATACTCATGAATTTTCAGAGTTTCTTTTACCTCTTCTTGATTTTGCACCCGAGAAGCGACCAACTGCAGAACAGTGCCTGCAACACCCTTGGCTCATGGAAAAGGACTCTGTTCCTGATGAAATGAGAAATGAATCTAGTGTGGAAAAAGTGGATGTTGGAATAAGCAACCTTAAAATCAAGGTGGGGGAGTGA 1338 0.4417 MSCSSSSGSEDDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAFDTTNDTYVALKIQKSAAQFVQAALHEIDVLSSIADGAPSNSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLVRYNRYKGLPMNKVREICRCILIGLDYLHREHGIIHTDLKLENVLLVSTIDPAKDPVRSGVSPILERPEGNINGAVTSLIEKKLKRRARRAVAKISGQRGSMGGMGEAPNSDRNIDGIDVRCKVVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVATAGVKSKDFFDRHGDLKRIRRLKFWPLNKLLIERYKLSESDTHEFSEFLLPLLDFAPEKRPTAEQCLQHPWLMEKDSVPDEMRNESSVEKVDVGISNLKIKVGE 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02247 445 FunFam Protein kinase superfamily protein 24 123 - -
Mepo1g02247 445 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Mepo1g02247 445 CDD STKc_SRPK 27 413 - -
Mepo1g02247 445 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Mepo1g02247 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Mepo1g02247 445 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02247 445 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Mepo1g02247 445 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02247 445 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 240 425 - -
Mepo1g02247 445 SUPERFAMILY Protein kinase-like (PK-like) 32 423 IPR011009 -
Mepo1g02247 445 FunFam Serine/threonine-protein kinase SRPK 115 413 - -
Mepo1g02247 445 Pfam Protein kinase domain 39 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02247 445 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02247 Mepo-Chr1 23095557 23099781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02247 4 428 EF-hand Containing Proteins AT5G22840 49.266 2.14e-164 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Mepo1g02247 Pkinase 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02247 K08832 - gmx:100814976 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01108 5 11105231 11109189 Mepo1g02247 1 23095557 23099781 PCT