Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo1g02247 | ATGTCTTGTTCTTCTTCATCTGGGTCTGAAGATGATGATGAGGGCTTTGATTCCTACCGGAAAGGTGGCTATCACGCTGTCCGGGTCGGTGATCAGTTCGCCGGTGGAAGGTATATAGCTCAGAGGAAATTGGGTTGGGGTCAGTTTTCAACCGTTTGGCTTGCTTTTGATACTACCAACGATACATATGTTGCTCTCAAGATCCAGAAAAGTGCAGCACAGTTTGTTCAGGCTGCTCTTCACGAGATAGATGTTCTTTCGTCCATTGCTGATGGCGCCCCTTCAAATTCAAAATTTGTTGTCCAATTGATCGACCACTTTAAGCACACAGGTCCTAACGGCCAGCACCAATGCATGGTACTCGAGTTTCTTGGAGATAGCTTGCTACGTCTAGTCAGATACAACCGTTACAAAGGTCTTCCGATGAATAAAGTCAGGGAGATTTGTCGATGCATTTTGATTGGTTTGGATTACTTGCATAGGGAACATGGTATTATACACACAGACCTAAAACTTGAAAATGTTCTTCTGGTTTCTACTATCGATCCGGCGAAAGACCCTGTTAGATCGGGAGTCTCCCCAATTTTAGAGAGGCCCGAGGGAAACATAAACGGCGCGGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGGAGAGCAAGGAGGGCGGTAGCTAAAATTTCTGGACAAAGAGGTTCTATGGGAGGAATGGGAGAAGCTCCAAATTCTGATAGAAATATTGATGGGATTGATGTTAGATGCAAAGTGGTTGATTTTGGAAATGCGTGTTGGGCTGATAAGCCATTTGCGGAAGAAATTCAGACACGACAGTATAGAGCTCCTGAAGTTATACTGCAGGCTGGTTATTCCTTCTCCGTCGATATGTGGTCTTTTGCTTGTATTGCTTTCGAGCTTGCCACTGGGGATATGTTATTTACTCCCAAAGTCGGACAAGGTTTTAGCGAGGACGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGCTACCGCAGGAGTGAAATCCAAGGATTTCTTCGACAGACACGGGGATCTCAAAAGGATTCGGAGGCTAAAATTTTGGCCTCTTAACAAACTATTGATTGAAAGATACAAATTATCAGAGAGTGATACTCATGAATTTTCAGAGTTTCTTTTACCTCTTCTTGATTTTGCACCCGAGAAGCGACCAACTGCAGAACAGTGCCTGCAACACCCTTGGCTCATGGAAAAGGACTCTGTTCCTGATGAAATGAGAAATGAATCTAGTGTGGAAAAAGTGGATGTTGGAATAAGCAACCTTAAAATCAAGGTGGGGGAGTGA | 1338 | 0.4417 | MSCSSSSGSEDDDEGFDSYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAFDTTNDTYVALKIQKSAAQFVQAALHEIDVLSSIADGAPSNSKFVVQLIDHFKHTGPNGQHQCMVLEFLGDSLLRLVRYNRYKGLPMNKVREICRCILIGLDYLHREHGIIHTDLKLENVLLVSTIDPAKDPVRSGVSPILERPEGNINGAVTSLIEKKLKRRARRAVAKISGQRGSMGGMGEAPNSDRNIDGIDVRCKVVDFGNACWADKPFAEEIQTRQYRAPEVILQAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALMMELLGKMPRKVATAGVKSKDFFDRHGDLKRIRRLKFWPLNKLLIERYKLSESDTHEFSEFLLPLLDFAPEKRPTAEQCLQHPWLMEKDSVPDEMRNESSVEKVDVGISNLKIKVGE | 445 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo1g02247 | 445 | FunFam | Protein kinase superfamily protein | 24 | 123 | - | - | |
Mepo1g02247 | 445 | Gene3D | Transferase(Phosphotransferase) domain 1 | 92 | 413 | - | - | |
Mepo1g02247 | 445 | CDD | STKc_SRPK | 27 | 413 | - | - | |
Mepo1g02247 | 445 | ProSitePatterns | Protein kinases ATP-binding region signature. | 44 | 67 | IPR017441 | GO:0005524 | |
Mepo1g02247 | 445 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 165 | 177 | IPR008271 | GO:0004672|GO:0006468 | |
Mepo1g02247 | 445 | ProSiteProfiles | Protein kinase domain profile. | 38 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo1g02247 | 445 | Gene3D | Phosphorylase Kinase; domain 1 | 24 | 123 | - | - | |
Mepo1g02247 | 445 | SMART | serkin_6 | 38 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo1g02247 | 445 | PANTHER | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED | 240 | 425 | - | - | |
Mepo1g02247 | 445 | SUPERFAMILY | Protein kinase-like (PK-like) | 32 | 423 | IPR011009 | - | |
Mepo1g02247 | 445 | FunFam | Serine/threonine-protein kinase SRPK | 115 | 413 | - | - | |
Mepo1g02247 | 445 | Pfam | Protein kinase domain | 39 | 179 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mepo1g02247 | 445 | Pfam | Protein kinase domain | 252 | 413 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo1g02247 | Mepo-Chr1 | 23095557 | 23099781 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo1g02247 | 4 | 428 | EF-hand Containing Proteins | AT5G22840 | 49.266 | 2.14e-164 | 472 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_SRPK | Mepo1g02247 | Pkinase | 1.1e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo1g02247 | K08832 | - | gmx:100814976 | 766.148 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo5g01108 | 5 | 11105231 | 11109189 | Mepo1g02247 | 1 | 23095557 | 23099781 | PCT |