Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02229 ATGCAGTCAGAAGTTAACTTCTTAGGAAGGCTCTCTCACCCAAACTTGGTGAAGCTATTAGGTTACTGTTGGGACGATGACGAGCTTCTTCTTGTGTATGTGTTCATGCCAAAAGGAAGTCTGGAGAATCATCTCTTCAGAAGAAATCGTAACATTGAACCACTTTCTTGGAACACAAGAATCAAAATCGCTATCGGTGCAGCTCGTGGTTTGGCTTTCTTGCATGATTCCGCACAGCAAGTCATATACAGAGATTTTAAGGCTTCAAATATACTCCTTGATGGGAATTACAATGCAAAAATCTCAGATTTCGGATTAGCTAAATTGGGGCCTTCTGGGGGACAATCACATGTAACTACCAGGGTCATGGGGACTTATGGTTATGCTGCTCCAGAATACATTGCAACAGGACACTTGTATGTGAAGAGTGATGTGTATGGCTTTGGTGTGGTGCTGTTAGAAATCTTAACAGCCATGAGGGCATTGGACACAAAGAGGCCAACAGGACAACAAAACCTAGTTGAATGGGTGAAACCTTTTCTGTCCAATAAGAAAAAATTGAAAGGCATAATGGATGCTAGAATAGAAGGACAATACTCACCAAAGGCAGCAGTACAAAGCAGCAGCACTTTCTCTAAAGTGCTTAGAAAATGA 654 0.4174 MQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYVFMPKGSLENHLFRRNRNIEPLSWNTRIKIAIGAARGLAFLHDSAQQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTAMRALDTKRPTGQQNLVEWVKPFLSNKKKLKGIMDARIEGQYSPKAAVQSSSTFSKVLRK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02229 217 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Mepo1g02229 217 Pfam Protein tyrosine and serine/threonine kinase 2 158 IPR001245 GO:0004672|GO:0006468
Mepo1g02229 217 FunFam Putative receptor-like serine/threonine-protein kinase 36 210 - -
Mepo1g02229 217 PANTHER OS01G0588500 PROTEIN-RELATED 2 212 - -
Mepo1g02229 217 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02229 217 Gene3D Transferase(Phosphotransferase) domain 1 37 217 - -
Mepo1g02229 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Mepo1g02229 217 SUPERFAMILY Protein kinase-like (PK-like) 2 180 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02229 Mepo-Chr1 22903267 22908803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02229 4 217 Glycoside Hydrolase AT3G07070 53.953 4.17e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo1g02229 PK_Tyr_Ser-Thr 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02229 - - gmx:100794193 381.719