Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02220 ATGAATGACTTGATGACAAAATCGTTCCTAAGTTATGTGGAATTGAAGAAACAGGCACAGAAAGATTTTGAAGATGTTGACCTTGAACTAGGGAACCTCAACCCAACACAAGACCCTAACCTCTCTCAATTCTTCCAAGAAGTTGAAGCAATCAAGGTTGAAATGGAAGAGATCACCAATCTCTTATTAGATCTTCAGCAACTGAATCAAGAGACAAAATCCACTCACAGTGCGAAAGTTCTTCGCGGGTTAAGAGACCGAATGGATTCCAATATGGTTGCCGTGCTGCACAAGGCGAATATAATCAAGGCAAGGTTAGAGGCTCTTGAGAAATCAAACATTGCGAATCAAAGCATATCAGAATGCTACAAAGAAGGAATTAGTCCTATTGATAGAACAAAAATTTCTGTGACAAATGGTTTGAAGGGGAAGCTTAGGGACATGATGAATGATTTTCAGTCCTTGAGGGATAAGATTGTGTTGGATCATAAGGAGGATTTGAAGAGAAGGTACTATACTGTCACAGGTGAGGTACCTAGTGATGAGGTTATGGAGAAGATGATATCAGGGAGTCTCAAAGTTGAGTTTTTGGCTGGGAATATGGGTACTACTCAGGTTAGGCATGAGGCTGTGATGGATATTCAGAGGAGTTTGAATAAGCTTCATTAG 669 0.4021 MNDLMTKSFLSYVELKKQAQKDFEDVDLELGNLNPTQDPNLSQFFQEVEAIKVEMEEITNLLLDLQQLNQETKSTHSAKVLRGLRDRMDSNMVAVLHKANIIKARLEALEKSNIANQSISECYKEGISPIDRTKISVTNGLKGKLRDMMNDFQSLRDKIVLDHKEDLKRRYYTVTGEVPSDEVMEKMISGSLKVEFLAGNMGTTQVRHEAVMDIQRSLNKLH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02220 222 PANTHER SYNTAXIN 44 222 IPR045242 -
Mepo1g02220 222 CDD SynN 41 192 IPR006011 GO:0016020
Mepo1g02220 222 Coils Coil 48 75 - -
Mepo1g02220 222 Gene3D - 37 222 - -
Mepo1g02220 222 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 38 170 - -
Mepo1g02220 222 SUPERFAMILY t-snare proteins 40 222 IPR010989 GO:0016020|GO:0016192
Mepo1g02220 222 SMART SynN_4 36 164 IPR006011 GO:0016020
Mepo1g02220 222 Pfam Syntaxin 43 222 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02220 Mepo-Chr1 22857482 22858258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02220 1 222 SNARE and Associated Proteins AT2G18260 57.447 9.18e-85 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02220 K08486 - gmx:112997615 332.798