Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02219 ATGGGGCTACCCCGTTCTGATTCTCGAATCCGAATTCTTACTTTTTCGGAAGACATGGAAGACAACAATAAAAATGATTCATGTAAATCATTGTCACCAACTAATGGCGCTCATAGTGATAGTGTTATGAGTCCCACTAATGGTGAGTGCAATTTTGGGAGTCTCTTCAAGATGGAAATTGGAGCTACCAGCAGAAGTCATAAGCCAAATATTTCAGAAGATGAAGAAGTTGCTGCGTGCAAATTGAAGGGCGTTGCTGAAAGTGTAAACATCAATGTTCGTTCCTTCAATGGTTCAAAGTTTTGTGTTGAAGCTGCACTAAAATCCACAGTTGAATCCTTCAAAGAGCTTATCATTAGAAACTGTGACATCCCAATCCAAAATCAAAGACTCATTTACAAGGGAAACATCTTGCAAAATAATCAATCCCTTCAAAGCTATGGTTTGGGACCAAATCATACTGTCTATTTGGTTCGTTGTTATGCACCCACCGATGCAAATGATGGGACCAACAATATGGACATTGATGCTGATGGTGAGAGGGATGGCTTACTTGCGGACGGTTTTGAACCAATGCAGCGCTGCCATCCACTACATTGTTCCATTAATCCTCGCTTTTTAAGAGAATTTCTAAGCACACCGGATCTGCAGTGCCTAGTTTTGAATCCTGATATCATGTGGAGTTTTTTAACGAACCATCAAGAGCTGTCCAACATAGTTTTTGATCCAAGCAGTGTGAGCCGGGTTCTTGAAGATGTAAGGATCCCTGGGATCGTGCACGAAATAAGGAGACTAGCTGACCTCGAACTGGGCAGCATTGAATCTATTCCTGGGGGATTAAACCAGTTGAGGTACATTTATGAAGAAATTGTAGAAGAAAATGTCGCTGCAGGAATCTATGAAAGCCAAGCCAGGGATCAGTCAACTAGTAGTGAAACAAATGCTGGTTCTTCGTTACCAAATACTACTCCACTTCCCAATCCTTGGTCTTTTGCAGGAATTGAAGGTGATCTAAGTAACATAAGAAGATCAACTACTTATGAGGATGATTATATACAACACGAACCTGTTGTCTTAGAAAGAATTGATTTTTCCAATATTGATAGCCTGTTGGGTGGACATGTTATGCCAAATGCTAATTTATCGACCCAATTAGTGCAAGATCAACCTGCCCTACAAGAATTTATACCTTCCCACCCAGAGTTTGATGGTCGTAATGGTGAACAAAATGGCAAGGCTGATTTAAGTTTTCTCAGAGAAGAGATTCAAAATCCAGATTTCCTTTCTTTGTCTTCACAACGTGAGACATTGCAGCAACCATTGTCTTCACAACAAGATCTTCTGCCTCATCTTAATCAGCAAGAATCAATGCAGGAACCGGGTCAGACAACTGGAGGCACTAGTAGTGGTATGCAAGATAATCCCTTCATTCTCTTTGAGGATGCAGAACAATTGTATGCCACCCAACTTTCACATCTTCAAGAGATGGGATTTTTTGACACACAAGAAAACATAAGATCTCTTATTGCCACTTCAGGGGATGTTCATGCTGCAATTCAATATCTTTCGAGGAACTCCAATCAGTAG 1587 0.4071 MGLPRSDSRIRILTFSEDMEDNNKNDSCKSLSPTNGAHSDSVMSPTNGECNFGSLFKMEIGATSRSHKPNISEDEEVAACKLKGVAESVNINVRSFNGSKFCVEAALKSTVESFKELIIRNCDIPIQNQRLIYKGNILQNNQSLQSYGLGPNHTVYLVRCYAPTDANDGTNNMDIDADGERDGLLADGFEPMQRCHPLHCSINPRFLREFLSTPDLQCLVLNPDIMWSFLTNHQELSNIVFDPSSVSRVLEDVRIPGIVHEIRRLADLELGSIESIPGGLNQLRYIYEEIVEENVAAGIYESQARDQSTSSETNAGSSLPNTTPLPNPWSFAGIEGDLSNIRRSTTYEDDYIQHEPVVLERIDFSNIDSLLGGHVMPNANLSTQLVQDQPALQEFIPSHPEFDGRNGEQNGKADLSFLREEIQNPDFLSLSSQRETLQQPLSSQQDLLPHLNQQESMQEPGQTTGGTSSGMQDNPFILFEDAEQLYATQLSHLQEMGFFDTQENIRSLIATSGDVHAAIQYLSRNSNQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02219 528 ProSiteProfiles Ubiquitin domain profile. 89 158 IPR000626 GO:0005515
Mepo1g02219 528 MobiDBLite consensus disorder prediction 455 474 - -
Mepo1g02219 528 MobiDBLite consensus disorder prediction 21 44 - -
Mepo1g02219 528 SMART ubq_7 89 160 IPR000626 GO:0005515
Mepo1g02219 528 SUPERFAMILY Ubiquitin-like 83 178 IPR029071 -
Mepo1g02219 528 SUPERFAMILY UBA-like 481 526 IPR009060 GO:0005515
Mepo1g02219 528 Pfam UBA/TS-N domain 486 522 IPR015940 -
Mepo1g02219 528 CDD UBA_PLICs 486 522 - -
Mepo1g02219 528 MobiDBLite consensus disorder prediction 26 44 - -
Mepo1g02219 528 Gene3D - 469 528 - -
Mepo1g02219 528 MobiDBLite consensus disorder prediction 302 326 - -
Mepo1g02219 528 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 480 525 IPR015940 -
Mepo1g02219 528 PANTHER UBIQUILIN 83 522 IPR015496 -
Mepo1g02219 528 Pfam Ubiquitin family 91 158 IPR000626 GO:0005515
Mepo1g02219 528 SMART uba_6 486 524 IPR015940 -
Mepo1g02219 528 Gene3D - 85 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02219 Mepo-Chr1 22850055 22856261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02219 K04523 - gmx:100776447 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02219 1 22850055 22856261 Mepo1g02219 1 22850055 22856261 ECH
Mepo5g01077 5 10696680 10703107 Mepo1g02219 1 22850055 22856261 PCT