Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g02215 | ATGGTGAATACTTCTGAAGAGAACAATTCCAACGCAGTTATGCCAAGAAAATTTCAAGGAGGAATGAATCAAGTGGGTCGTGGTGGTGGAAGAATTGTTGGGCAGAACAGAAGAGCTTTAGGAGGGATTAATCAGAATTTTGTGCATGGTCGACCTTACCCTTGTGTTGTACACAAGAGGGTGTTGTCTGAAAAACATGAGATTTGTGAAAAGAAACAGGCTGATCTGGGACATAGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTGGCTCACAGCAATCTTATGCTGAGAAAACTAAGAATTCAAATCCATTGAATTCGAATGAGTTTGGAAACTCCATAGCCATTGATGATGAACTCAAGTCACCAGAAGACCAACCAGAGCCTATGACTTTGGAGCATACTGAACCAATGCATAGTGATCCACTTGAGATGGAAGAGGTTGAGATGGAGGATATAGAGGGAGAGATGATTTTGGACATCGATAGCTGTGATGCAAACAATTCTCTTGCTGTTGTGGAGTATATTGAAGATCTCCATGCTTACTACAGAAAGATTGAGTATCTTGGCTGTGTTTCACCAACCTACATGGATGAACAACTTGACCTCAATGAGAGGATGAGGGCTATACTAGTTGACTGGCTGATTGAGGTTCATGACAAATTCGACCTCATGCAAGAGACACTGTTTCTTACAGTTAATCTCATAGACAGATTCTTGGCTAAGCAGAATGTTGTAAGAAAGAAACTTCAACTGGTTGGTCTTGTTGCCATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCTGTCGTTTCAGATCTGATCCATATAGCTGACAGAGCTTACACAAGGAAAGACATTCTCGAAATGGAGAAGTCGATGCTCAACACTCTGCAGTATAACATGTCTCTTCCAACTGCTTATGTTTTCATGAGAAGATTTCTGAAGGCTGCTCAAGCTGACAAAAAACTTGAGCTGGTGGCTTTTTTCTTGGTTGAGCTATCTCTGGTGGAATATGAAATGCTGAAGTTTCCACCATCCTTGGTTGCTGCTGCTGCTGTCTACACTGCTCAATGCACTGTCAGTGGTTTCAAACACTGGAACAAGACATGTGAGTGGCACACAAACTACTCAGAAGATCAGCTGTTAGAGTGCTCTATGCTGATGGTTGGATTCCACCAGAAAGCTGGAACCGGAAAACTGACAGGAGTACATAGGAAGTATGGCTCAGCAAAATTTAGCTTCACTGCTAAATGTGAACCAGCATGTTTTCTTCTGGAGAACAAGAACCAGCCATAG | 1305 | 0.4245 | MVNTSEENNSNAVMPRKFQGGMNQVGRGGGRIVGQNRRALGGINQNFVHGRPYPCVVHKRVLSEKHEICEKKQADLGHRPITRRFAAQIAGSQQSYAEKTKNSNPLNSNEFGNSIAIDDELKSPEDQPEPMTLEHTEPMHSDPLEMEEVEMEDIEGEMILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEVSVPVVSDLIHIADRAYTRKDILEMEKSMLNTLQYNMSLPTAYVFMRRFLKAAQADKKLELVAFFLVELSLVEYEMLKFPPSLVAAAAVYTAQCTVSGFKHWNKTCEWHTNYSEDQLLECSMLMVGFHQKAGTGKLTGVHRKYGSAKFSFTAKCEPACFLLENKNQP | 434 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g02215 | 434 | FunFam | G2/mitotic-specific cyclin-1 | 288 | 419 | - | - | |
| Mepo1g02215 | 434 | SUPERFAMILY | Cyclin-like | 168 | 304 | IPR036915 | - | |
| Mepo1g02215 | 434 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Mepo1g02215 | 434 | Pfam | Cyclin, N-terminal domain | 182 | 305 | IPR006671 | - | |
| Mepo1g02215 | 434 | MobiDBLite | consensus disorder prediction | 90 | 112 | - | - | |
| Mepo1g02215 | 434 | Gene3D | - | 193 | 305 | - | - | |
| Mepo1g02215 | 434 | CDD | CYCLIN_AtCycB-like_rpt1 | 156 | 302 | - | - | |
| Mepo1g02215 | 434 | PANTHER | CYCLINS | 133 | 402 | IPR039361 | - | |
| Mepo1g02215 | 434 | SMART | Cyclin_C_2 | 307 | 424 | IPR004367 | - | |
| Mepo1g02215 | 434 | SUPERFAMILY | Cyclin-like | 307 | 423 | IPR036915 | - | |
| Mepo1g02215 | 434 | CDD | CYCLIN_AtCycB-like_rpt2 | 307 | 423 | - | - | |
| Mepo1g02215 | 434 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Mepo1g02215 | 434 | PIRSF | Cyclin_A_B_D_E | 2 | 433 | IPR046965 | GO:0016538|GO:0044772 | |
| Mepo1g02215 | 434 | ProSitePatterns | Cyclins signature. | 209 | 240 | IPR006671 | - | |
| Mepo1g02215 | 434 | Gene3D | - | 179 | 417 | - | - | |
| Mepo1g02215 | 434 | Pfam | Cyclin, C-terminal domain | 307 | 422 | IPR004367 | - | |
| Mepo1g02215 | 434 | SMART | cyclin_7 | 311 | 393 | IPR013763 | - | |
| Mepo1g02215 | 434 | SMART | cyclin_7 | 214 | 298 | IPR013763 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo1g02215 | Mepo-Chr1 | 22788322 | 22792610 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo1g02215 | 5 | 428 | Core Cell Cycle Gene Families | AT1G20610 | 56.512 | 7.36e-170 | 481 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g02215 | K21777 | - | gmx:100798068 | 620.542 |