Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02185 ATGAATTTCAATTCTTCAAAGTATATTTCCCATTTACCAGAATCACTTTTACCAAATGATGCATCACCAGAATGGAACAACAAAGCAGACAATGCATGGCAACTAACAGCAGCAACATTAGTGGGACTTCAAACTGTTCCTGGGCTTGTAATACTTTATGGCAGCATGGTGAAGAAAAAATGGGCTGTAAATTCAGCTTTCATGGCCCTATATGCATTTGCTGCTGTACTAGTTTGTTGGGTTTTGTGGGCCCATCATATGGCATTTGGTGCCAAGCTTTTGCCTTTTGTTGGAAAGCCAAACTTTGCCTTGAGTCAGAAGTTTCTACTTTCCAAGGCATCAACAAATTATTATTTACCAATGGCTGATTTTGTTTTCTATCAATTTGCTTTTGCTGCAATTACTCTTGTGTTGCTTGGAGGGTCTTTGCTTGGGAGAATGAATTTCTATGCATGGATGTTGTTTGTTCCTATGTGGCTTACATTGTCTTATACTGTTGGTGCTTTTACTATATGGGGGAATGGCTTTCTTGAGGGGAAAATAATTGATTATGCTGGAGGATTTGTAATTCATCTATCATCTGGTGTTGCAGGTTTCACAGCTGCTTATTGGGTTGGTCCAAGAACTTCAAATGATAGACAAAGTTTTCCTCCAAATAACATAATTCACATGCTTGGAGGTGCAGGGTTCTTATGGATGGGTTGGACAGGTTTTAATGGTGGAGCACCATTTCAAGTGGGAGAGATTACATCCTTGGCAATATTCAATACTCATTTGTGCACTTCTACAAGCATACTTGTTTGGCTTTCTCTAGATATGGCTGTATACAAGAAGGGCTCATTGATAGGTTCTGTCCAAGGAATGATGACCGGTCTCGTTTGCATTACACCGGGTGCAGCAATACTGATGGGAGTTTTGTCGGGTTCAATTCCATGGTACACGATGATGGTGTTGCACAAAAAATCATCATTCTTTCAACGTGTAGATGATACATTAGGAGTCTTTCACACTCATGCTGTGGCTGGTATTCTTGGGGGAATTCTTTCTGGTGTGTTTGCCAAACCTAAACTTTTGAGGATTCTCTATGGACCTGAAACTCCTTATGGGTCTGGCTTATTCTATAGTTATTTTGATGATGATATAGGCCAAGGAATCAAGCAAATGTGGTACCAATTATTAGGAGCAATTTTTATTACTATTTGGAATGTAGTTATTACTAGTCTCATTTGTATTCTTTTAAATCGCTTTGTGAATCTTCGAATGCAAGAAGACGACCTTGAAGTTGGTGATGATGCTGCTCATGGGGAAGAAGCTTATGTATTATGGGGTGATGGAGAAAGAATGCGGCTCCCTCTTCGTCTACATACAAGTCCAATAATTCCTTCCATTTTTCACCAAAGACATTCAACTTCTATCAATAAAATTGATCGATGA 1434 0.3919 MNFNSSKYISHLPESLLPNDASPEWNNKADNAWQLTAATLVGLQTVPGLVILYGSMVKKKWAVNSAFMALYAFAAVLVCWVLWAHHMAFGAKLLPFVGKPNFALSQKFLLSKASTNYYLPMADFVFYQFAFAAITLVLLGGSLLGRMNFYAWMLFVPMWLTLSYTVGAFTIWGNGFLEGKIIDYAGGFVIHLSSGVAGFTAAYWVGPRTSNDRQSFPPNNIIHMLGGAGFLWMGWTGFNGGAPFQVGEITSLAIFNTHLCTSTSILVWLSLDMAVYKKGSLIGSVQGMMTGLVCITPGAAILMGVLSGSIPWYTMMVLHKKSSFFQRVDDTLGVFHTHAVAGILGGILSGVFAKPKLLRILYGPETPYGSGLFYSYFDDDIGQGIKQMWYQLLGAIFITIWNVVITSLICILLNRFVNLRMQEDDLEVGDDAAHGEEAYVLWGDGERMRLPLRLHTSPIIPSIFHQRHSTSINKIDR 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02185 477 Pfam Ammonium Transporter Family 32 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mepo1g02185 477 ProSitePatterns Ammonium transporters signature. 183 208 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mepo1g02185 477 PANTHER AMMONIUM TRANSPORTER MEP2 15 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mepo1g02185 477 SUPERFAMILY Ammonium transporter 25 421 - -
Mepo1g02185 477 Gene3D Ammonium transporter AmtB like domains 13 442 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02185 Mepo-Chr1 22397698 22399961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02185 121 447 Inorganic Solute Cotransporters AT2G38290 57.313 1.51e-129 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02185 K03320 - gmx:100815876 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02991 2 39569238 39574543 Mepo1g02185 1 22397698 22399961 PCT