Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02176 ATGGCACGACAAAAAGCAGCCGCCATTGTAAACAAGGGTGTAAGTGGTTCGGACAAAACCGATGAAACCGAAAATCCAAACCGAACCAAACCGAAAAAGTATCCGACCTTGTTTGGAAAGGAGTATAAAAGCGCGAAATACGACAAAATATCTTTAAGGTGTTTTACTATTGAGGAACTAGAGAGAGCTACCAAAAATTTCAGCCAAGATTGCTTATTGGGTTCTGGTGCATTTTGTAATGTCTACAAAGGAACTTTTGAGTTAGAAGGAATACTAGCCATAAAGAGACCTCATTCTGAATCATTCTTAAGTGTTGAGGAATTCAGAAATGAAGTTAGGCTTCTTTCAGCAGTAAAGCACAAGAATCTTATTGGTCTGGTTGGATATTGTGAAGAACCAGAACGAGATGGAGCAAAAATACTAGTCTATGAATATGTACCAAACGGTTCCCTCTTGGAATACATGATGGGAAACAGAAGGAGAAGCTTAACTTGGAAGCAAAGAATAAACGTAGCAATTGGAGCAGCTAAAGGCATAGCTTATTTGCATGAAAAGGTGAAGCCAAGCATAATCCATCGTGACATCAAACCTAGTAACATACTATTAGGAGAAGGTTTTGAGGCCAAGGTTTCAGATTTTGGGCTGGTAAAATCAGGTCCTACTGGTGATCAATCACATGTCAGTAGCCAAATCAAAGGGACACCAGGGTACCTTGACCCTGCATATTGTTCAAGCTGCCATTTGACCAAATTCAGTGATGTGTATAGCTTTGGTGTCATACTTTTGCAACTTATTTCAGCTAGACCTGCAGTGGATAATGCTGAAAACCCAAGTAACCAACATATTATTGATTGGGCAAGACCTAGCATAGAGAAAGGTAACATTGCAGAAATCATGGACGCAAATCTATTTTGTCAGAGTGAGGCATGCAATATGGAAGTTATGTTAAAGGTGGGGCAACTTGGTATAAGATGTGTGGCTCAAGAACCAAAACATCGCCCCACAATGACCCAAGTTTGTAAAGAACTAGAACATGCCCTCTACTCAGATGATAGCTTCACTAACAAGGATTCAGAAACCCTTGGATCGGTGGAACACTATGATTTTTCACAGGGCTTTGTGAGCATAGAAGGTGTTGGACTTGAGAAATTTCATATTGATATGGACAGCTTCTCCTTTAAGAGCATAAACTTAAGGTGTCTAGAAAATAATAGCATTAGTATTGACATTGACAAGAACAATTTGACAAGAAATCAATAG 1260 0.3937 MARQKAAAIVNKGVSGSDKTDETENPNRTKPKKYPTLFGKEYKSAKYDKISLRCFTIEELERATKNFSQDCLLGSGAFCNVYKGTFELEGILAIKRPHSESFLSVEEFRNEVRLLSAVKHKNLIGLVGYCEEPERDGAKILVYEYVPNGSLLEYMMGNRRRSLTWKQRINVAIGAAKGIAYLHEKVKPSIIHRDIKPSNILLGEGFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSCHLTKFSDVYSFGVILLQLISARPAVDNAENPSNQHIIDWARPSIEKGNIAEIMDANLFCQSEACNMEVMLKVGQLGIRCVAQEPKHRPTMTQVCKELEHALYSDDSFTNKDSETLGSVEHYDFSQGFVSIEGVGLEKFHIDMDSFSFKSINLRCLENNSISIDIDKNNLTRNQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02176 419 Gene3D Phosphorylase Kinase; domain 1 34 145 - -
Mepo1g02176 419 Gene3D Transferase(Phosphotransferase) domain 1 146 367 - -
Mepo1g02176 419 SMART serkin_6 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02176 419 MobiDBLite consensus disorder prediction 17 34 - -
Mepo1g02176 419 PANTHER OS01G0750732 PROTEIN 40 351 - -
Mepo1g02176 419 FunFam Putative LRR receptor-like serine/threonine-protein kinase 40 145 - -
Mepo1g02176 419 ProSiteProfiles Protein kinase domain profile. 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02176 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Mepo1g02176 419 Pfam Protein tyrosine and serine/threonine kinase 72 343 IPR001245 GO:0004672|GO:0006468
Mepo1g02176 419 MobiDBLite consensus disorder prediction 1 34 - -
Mepo1g02176 419 CDD STKc_IRAK 73 344 - -
Mepo1g02176 419 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 146 349 - -
Mepo1g02176 419 SUPERFAMILY Protein kinase-like (PK-like) 48 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02176 Mepo-Chr1 22324151 22332057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02176 53 356 Receptor kinase-like Gene Family AT1G30570 42.671 1.18e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo1g02176 PK_Tyr_Ser-Thr 4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02176 - - gmx:106794267 609.372