Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo1g02117 | ATGTCTTCATCTCGTGGCGGCGCTGAGGTTAGGGCTTCACACATACTGATTAAACACGAAGGTTCTAGAAGAAAAGCTTCGTGGAAAGATCCAGAAGGTTACGTCATCAAGAACACTACTCGTGAAAGTGCCGTTGCTATTCTTACTTCGATGAAAGAGGATATCCTTTCTGGTAAGGCGAAGTTTGAGGATCTTGCTTCGAGGTATTCTGATTGTAGCTCTGCTAAACGTGGTGGCGATCTTGGTCCTTTTGGTCGTGGCCAGATGCAGAAGCCTTTTGAAGATGCAACTTATGCTCTTCAAGTTGGTGAAATTAGTGACATTGTGGATAGTGACAGTGGATCCCACATAATCAAGAGAACAAATTGA | 369 | 0.439 | MSSSRGGAEVRASHILIKHEGSRRKASWKDPEGYVIKNTTRESAVAILTSMKEDILSGKAKFEDLASRYSDCSSAKRGGDLGPFGRGQMQKPFEDATYALQVGEISDIVDSDSGSHIIKRTN | 122 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo1g02117 | 122 | ProSiteProfiles | PpiC-type peptidyl-prolyl cis-trans isomerase family profile. | 7 | 122 | IPR000297 | GO:0003755 | |
| Mepo1g02117 | 122 | Pfam | PPIC-type PPIASE domain | 14 | 121 | IPR000297 | GO:0003755 | |
| Mepo1g02117 | 122 | ProSitePatterns | PpiC-type peptidyl-prolyl cis-trans isomerase signature. | 62 | 82 | IPR023058 | - | |
| Mepo1g02117 | 122 | FunFam | Peptidyl-prolyl cis-trans isomerase Pin1 | 4 | 122 | - | - | |
| Mepo1g02117 | 122 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 7 | 121 | - | - | |
| Mepo1g02117 | 122 | SUPERFAMILY | FKBP-like | 8 | 121 | - | - | |
| Mepo1g02117 | 122 | Gene3D | - | 6 | 122 | IPR046357 | GO:0003755 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo1g02117 | 40 | 119 | Sulfurtransferasese or Rhodanese | AT5G19370 | 28.750 | 7.89e-06 | 41.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo1g02117 | K09578 | - | egr:120292721 | 201.83 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo1g02117 | 1 | 21801303 | 21803959 | Mepo1g02117 | 1 | 21801303 | 21803959 | ECH |