Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02116 ATGATGAAGCGAGCAAGAAAATCTAATAGGGTTTCGTGGGCTTCTCCTGCTAATCTATGTCAGGTCAAATTGTTCTTGTCCGAAGATTACCCGTCAAAAGTTGGCCTGAATTTACAAGACAGTCTTGAAGCAAAGGCGTCATCAATGTTGTGTTCTAGTACTAATGAATCTATCGATTTACCTCCTGGGTTCGAAAGCGGTCATTTCCCTAACCAATCGAAGGTTCAATTCTCCCACATTCCTAAGATAAAATGGGAATGCCCTCTCTCGTTTGTGTTCAGTCCTAATTGGCTAGTTGCAGCTGGGCAAGAAAGTAGGGAGAAAGAGGTTCAGAAGCTGAGAGAAATAAGAGTGCTTGAAGCAGTTTATCCCCGACCCTCCGCCATTCCTCCTAGCCCTTCTGTTTCGTTGGATGTAGAAGAGGAAGAATATGATGATAACAGTACTCCTCTCATCCCCATCATTCCCATCGAAGAGGAAGAGTCTATGACTAATTTGCCTAAATTAGCAGCAGCAGTGAACACTCATCCCAATGTTCAGCCACAGAATTTGCATCAACACATGTCAGCAACAACTTCCATTAGTTCAGACTGTAACTCCTCCCGTACTGTCTCCTCAGATGCTCGTCTAATGCCCTTAGCAGGGGTATCTTCTAGTTTGGAAGCTGACGCAGCTGCAGCCTCTGAAGTTGTGGCGGCCATCTTGAAGAGTAATGATCAAGGAGGCTTAATTGATATGGATCTACTCGTAAAAATTTTAAATGACCCAAAAATGATTGAGACTTTGATCAATGAGCGTGGAGTTGCAGCCACCACTGCAAGTTCGTCCTCAAATTCCATGGTTACACCCACTTCTGGATTGAAAGCTGCCGCTCCTTCAGTTCCTTTGTTTACATCTACACTCGATGTGGCAGCTTCTAGGAACTCACACACTAGTTCTGTGGGTTTTTCTGGGTTGAAGCCTGCGATTCCATCAGTTTCATCTTTCAATCCTACATCTGGTAAGCCAACAACTCTGTTTGCTCCTGCAATTCCATCGCATTCAATTGTGTCTTCTGCACATGATAAGCCAGCAACTGCGTCAGCTCCATTGTCTAGGCCAGTATCCAGTAAACCAATATCCCCCTCTGTTTTTATGTCCACACCTACACCTGAATCTCATATGCCCAGACCTGTCAACAATAATTTTCACATGTCAAGTCCAATGCCAACTGCATTACATACTCAGCCTCAGCCAGATTCATTTCTGGCATCTGGGGTGAAGCGATCTGCATCTTTCATGTTTTCTTCTAGTGAACAAAGCACAGTTCCATTACCTCCTTCTGGGAACTTGCATACTGTTTTGAACAATACACAACCCACTGCCAGTACAAAGCCTTATCAAACCAGTTCAGGTTCAGCATCTGCTGTAAAGGATGTCAACTATTATAAAAACCTCATTAGGCAACATGGTGCAGATGGACAAGATAAGCTGGACTCACAAATAGGTAGCCGTCATAGTAACTTCCAAGATATGAAACTGGCACATAACAATAATCAAGGGGAAGTCAAATACAAAAGCAAGAAACAATGCATTTACTTTAATAGCTCTAGGGGGTGCAGAAATGGTTCCGATTGCCCCTTTCAGCATGATGTTTCAGCTGAGTCGGGAGCTGGTAACTTCCTAGGGGGGCAGAGTGCTAAAAGATTTAAGTTGTGA 1698 0.4376 MMKRARKSNRVSWASPANLCQVKLFLSEDYPSKVGLNLQDSLEAKASSMLCSSTNESIDLPPGFESGHFPNQSKVQFSHIPKIKWECPLSFVFSPNWLVAAGQESREKEVQKLREIRVLEAVYPRPSAIPPSPSVSLDVEEEEYDDNSTPLIPIIPIEEEESMTNLPKLAAAVNTHPNVQPQNLHQHMSATTSISSDCNSSRTVSSDARLMPLAGVSSSLEADAAAASEVVAAILKSNDQGGLIDMDLLVKILNDPKMIETLINERGVAATTASSSSNSMVTPTSGLKAAAPSVPLFTSTLDVAASRNSHTSSVGFSGLKPAIPSVSSFNPTSGKPTTLFAPAIPSHSIVSSAHDKPATASAPLSRPVSSKPISPSVFMSTPTPESHMPRPVNNNFHMSSPMPTALHTQPQPDSFLASGVKRSASFMFSSSEQSTVPLPPSGNLHTVLNNTQPTASTKPYQTSSGSASAVKDVNYYKNLIRQHGADGQDKLDSQIGSRHSNFQDMKLAHNNNQGEVKYKSKKQCIYFNSSRGCRNGSDCPFQHDVSAESGAGNFLGGQSAKRFKL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02116 565 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 565 - -
Mepo1g02116 565 MobiDBLite consensus disorder prediction 363 390 - -
Mepo1g02116 565 MobiDBLite consensus disorder prediction 352 390 - -
Mepo1g02116 565 ProSiteProfiles Zinc finger C3H1-type profile. 518 546 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02116 Mepo-Chr1 21788186 21796725 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo1g02116 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02116 - - cam:101501407 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02116 1 21788186 21796725 Mepo1g02116 1 21788186 21796725 ECH