Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02114 ATGGAGTCATGTGTCCCACCTGGATTTCGGTTCCACCCAACGGATGGAGAGCTTGTTGGTTATTATCTTAGAAAGAAAGTAGCTTCTCACAAGATTGATCTTGATGTTATCAAAGAGATTGATCTATATCGTATTGAGCCCTGGGATCTACAAGAGAGATGTAGAATTGGGAATGAAGAGCAACATGAGTGGTATTTTTTTAGTCACAAAGATAAGAAATATCCAACAGGGACGAGAACGAACAGAGCTACAATGGCAGGGTTCTGGAAAGCAACGGGAAGAGATAAGTCGGTGTATGAACGAACAAAACTGATTGGAATGAGGAAGACACTTGTTTTCTACAAAGGAAGAGCACCTAATGGACAGAAAACTGATTGGATCATGCATGAATATAGGCTTGAAACAGTTGAAAATGCACCTCCACAGGAAGAAGGTTGGGTTGTGTGCAAAGCATTCAAGAAAAAAACAAGTGTCCAAGCAAAAACAAATGAAAGATGGGATCCAAGCCACTTAAATGATGAACAAACAAGTAGCATCATCTCAAGGGTGGAACCCATTGACCTCATCTTTAGACAACCACAGAGGATTGCAGCTCAAAATTTCATGTACAAGCAAGAGATAGAAGCAGAAGCAGATACATTATTAAGCTTCATGCATTCAGAACAAATGGTACCTCTTCCTCAGCTAGAAAGTCCCTCTTTAACAAAGAGGCAAAACTCAATACCAATAATATCAGAACATAACAATAATGAATTTCAAAATGGATTATTATTCAACATCAACAACAAAAGAGAGAAAGTGACTGATTGGAGGGATCTTGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGATCATAGGCATGGAACAAGCTCAGACATGTCATTGTTCCTACTTCAAAGTAGTAAGGATGATGAAGAGAACAAGTTAAGCTCGTTTTTAACTACAAGGTCAGATTGTGACATTGGGATATGTGTATTTGAAAATTAA 990 0.3848 MESCVPPGFRFHPTDGELVGYYLRKKVASHKIDLDVIKEIDLYRIEPWDLQERCRIGNEEQHEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENAPPQEEGWVVCKAFKKKTSVQAKTNERWDPSHLNDEQTSSIISRVEPIDLIFRQPQRIAAQNFMYKQEIEAEADTLLSFMHSEQMVPLPQLESPSLTKRQNSIPIISEHNNNEFQNGLLFNINNKREKVTDWRDLDKFVASQLSQEDHRHGTSSDMSLFLLQSSKDDEENKLSSFLTTRSDCDIGICVFEN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02114 329 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 245 - -
Mepo1g02114 329 Pfam No apical meristem (NAM) protein 6 133 IPR003441 GO:0003677|GO:0006355
Mepo1g02114 329 ProSiteProfiles NAC domain profile. 5 154 IPR003441 GO:0003677|GO:0006355
Mepo1g02114 329 SUPERFAMILY NAC domain 3 154 IPR036093 GO:0003677|GO:0006355
Mepo1g02114 329 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Mepo1g02114 329 FunFam NAC domain-containing protein 14 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02114 Mepo-Chr1 21763605 21766944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02114 1 329 NAC Transcription Factor Family AT2G18060 58.856 1.27e-142 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g02114 NAM 4.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02114 - - aprc:113869508 471.085