Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02104 ATGGAAATGCACACATTATACACCAAATCCTTCTTGCTACCCTTATTCTTCCTTCTCCTCACGTCACTCATCTCACATTCTAAAGCTTGTAATGCAATAGACAAAGAAGCATTACTACAATTCAAGAACAAAATAACCTCTGACCCATCACAACTATTGAATTCTTGGACATTGTCCTCTGATTGTTGCAAAGGTTGGAATGGAGTCAAATGTGATTCCACCACAGGAAGAGTTGTTAGTCTCACTCTTTCCGGAACCGTCGACGACGGCATCGATTTACCTTTTGATACATATTTATCAGGAACATTATCACCTTATCTTGGAAACTTAACCAATCTCAAAATTTTAAGTCTCATCGGTTTAATGCAATTGAATGGTCCAATTCCTGTGGAGTTCGATAAACTTACCAAACTTGAGAAACTTTACCTTAATGACGATAAATTATCTGGTGATTTACCTTCCGAGATTGGATCTTTGATCTCCTTATTAGAACTTGGTCTATCGGGAAATAATTTTTCTGGAAGAATTCCATCTTCAATTGGAAACTTGAAGCTTCTAACTAGTCTTGATCTTAAAAAAAACAATCTTATCGGTGGCGTTCCAGAGAGCATTGGAAATCTTAAAAATCTAGGATTTCTAGATTTGTCTGGAAATAAAATTGGTGGAAAAATTCCAGAATCAATTGGTGGTCTTAAAAAATTAAATACACTTGATATAATGCAAAACAAGATTGAAGGAAATGTTCCTGTTTCTATTGGAGGACTTAGTTCTTTAACATTTTTAAGGTTATCAGATAATTTGTTAAGTGGTGTTTTACCTTCTGAGATTGGGAATCTCAAGAAATTGAAAAATTTGAATCTTCAGAACAACATGTTTAATGGGAATTTGCCTGCTTCCATTGGAAATTTAAGTAGTTTGAGGGAATTATTTCTTGGCAATAATCATTTTTCTGGAAAAATTCCAGCAACGTTTGGAAATTTGATGGATTTGCAAAATGTGGATTATTCAGGAAATAGGCTCAGAGGGAGAATTCCTAAAAGGATAGGGGATAATTGGGGTGCTGAATTAACAATGGAGTGTGTGAAAGCAGAAGCAGCTTTGAAAAGCAGTTTTAACATAAGCACAGCAGTGAAACTCACTCCACAAACGTTGTTAGAAGACATAGCTCCTATCGATGATTTCTTTGTCGATGATTTCCTTAACTTTTCCAACGAAGAACAAGAACATGAACATGAACAAGACTTTCTTGAAGAAAAACAACAAAACCATACCCCTCAATACACCACCCAAAACCAAATTTCACACTCCATACTCAACAACCAGTTTGTTTCATTACCTACTACCGAACTCACCGTTCCGGTAGAAGAAGCTGCTGATTTAGAATGGTTATCATATTTCGTTGAAGATTCCTTCTCAGAATTTCCCAAAACAGAAAATCTCCAACTTCAACAAAAAGCTCATGAACCAAAACCCACGTTTTCAACAATATGTTTCAAAACTCCGGTGCCGGCAAAAGCAAGAAGCAAGAGAACAAGAACCGGAGTTCGTGTATGGCCAATTTCATTAGCCAATTCATCTTCAACCTCAAGCTCAACTACACTTTCTTCCTCAAACCTCGAGGAATGTTCAAAACCACCGGAGAAAAAAGCGAAGAGGATGGTCTCACCGGAAGGAGAAGCAAGAGGCGTGCCGCGGCGGTGTAGTCATTGTGGAGTGCAGAAAACTCCTCAATGGCGAACCGGACCAGGTGGGCCGAAAACACTTTGTAATGCTTGTGGGGTTCGTTATAAATCGGGTCGGCTGTTACCGGAATATAGACCGGCTTGTAGCCCTACGTTTTCGAGTGAATTGCATTCAAATCATCACCGGAAAGTTATTGAGATGCGGCGGAAGAAGGAGGTTGTTCCCGGTCTTTGA 1917 0.3855 MEMHTLYTKSFLLPLFFLLLTSLISHSKACNAIDKEALLQFKNKITSDPSQLLNSWTLSSDCCKGWNGVKCDSTTGRVVSLTLSGTVDDGIDLPFDTYLSGTLSPYLGNLTNLKILSLIGLMQLNGPIPVEFDKLTKLEKLYLNDDKLSGDLPSEIGSLISLLELGLSGNNFSGRIPSSIGNLKLLTSLDLKKNNLIGGVPESIGNLKNLGFLDLSGNKIGGKIPESIGGLKKLNTLDIMQNKIEGNVPVSIGGLSSLTFLRLSDNLLSGVLPSEIGNLKKLKNLNLQNNMFNGNLPASIGNLSSLRELFLGNNHFSGKIPATFGNLMDLQNVDYSGNRLRGRIPKRIGDNWGAELTMECVKAEAALKSSFNISTAVKLTPQTLLEDIAPIDDFFVDDFLNFSNEEQEHEHEQDFLEEKQQNHTPQYTTQNQISHSILNNQFVSLPTTELTVPVEEAADLEWLSYFVEDSFSEFPKTENLQLQQKAHEPKPTFSTICFKTPVPAKARSKRTRTGVRVWPISLANSSSTSSSTTLSSSNLEECSKPPEKKAKRMVSPEGEARGVPRRCSHCGVQKTPQWRTGPGGPKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKEVVPGL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02104 638 CDD ZnF_GATA 566 614 IPR000679 GO:0006355|GO:0043565
Mepo1g02104 638 PANTHER UNNAMED PRODUCT 13 349 - -
Mepo1g02104 638 SMART GATA_3 561 615 IPR000679 GO:0006355|GO:0043565
Mepo1g02104 638 FunFam Leucine-rich repeat receptor protein kinase EMS1 277 362 - -
Mepo1g02104 638 Pfam Leucine rich repeat 162 220 IPR001611 GO:0005515
Mepo1g02104 638 Gene3D - 558 634 IPR013088 GO:0006355|GO:0008270
Mepo1g02104 638 ProSiteProfiles GATA-type zinc finger domain profile. 561 597 IPR000679 GO:0006355|GO:0043565
Mepo1g02104 638 Pfam GATA zinc finger 567 601 IPR000679 GO:0006355|GO:0043565
Mepo1g02104 638 MobiDBLite consensus disorder prediction 524 541 - -
Mepo1g02104 638 ProSitePatterns GATA-type zinc finger domain. 567 592 IPR000679 GO:0006355|GO:0043565
Mepo1g02104 638 SMART LRR_typ_2 303 326 IPR003591 -
Mepo1g02104 638 SMART LRR_typ_2 255 279 IPR003591 -
Mepo1g02104 638 SMART LRR_typ_2 207 231 IPR003591 -
Mepo1g02104 638 SMART LRR_typ_2 159 183 IPR003591 -
Mepo1g02104 638 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 95 276 - -
Mepo1g02104 638 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Mepo1g02104 638 MobiDBLite consensus disorder prediction 542 564 - -
Mepo1g02104 638 FunFam GATA transcription factor 557 637 - -
Mepo1g02104 638 Pfam Leucine Rich Repeat 305 327 IPR001611 GO:0005515
Mepo1g02104 638 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 561 622 - -
Mepo1g02104 638 Gene3D Ribonuclease Inhibitor 202 375 IPR032675 -
Mepo1g02104 638 Gene3D Ribonuclease Inhibitor 31 201 IPR032675 -
Mepo1g02104 638 MobiDBLite consensus disorder prediction 524 564 - -
Mepo1g02104 638 SUPERFAMILY L domain-like 29 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02104 Mepo-Chr1 21640010 21643823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02104 364 633 C2C2-Gata Transcription Factor Family AT5G66320 44.762 3.71e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo1g02104 LRR_8 6e-07 CL0022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02104 1 21640010 21643823 Mepo1g02104 1 21640010 21643823 ECH