Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02096 ATGGCTGGTTTGTTCTCGTTAGGAGGTGGAGGAAGAGGAAACCAAGGAGAAGAATCACAACAACAACAAGGTCATATTCCACCACAAGAGACACTATTTTGGTACAACAAAAACGATGATGTTTCATCTTACAGAGGTAATTTAGAATTATGGAACCAACACCAGCAGCAACAACAACAAGATGATATGCATGCTGCACGGCCGTTCTTCCCGCGAGATCTCTACGGTTTAGGTGTTGGACCAAGCAGGGTTTCATCAGATGATCATGAACATCAATCATCGTCGAGATCGGCAGCGTTTACTATGGCGATGAGGTCTTCTTCTTCAGCTGAAGGAATAAGTTGTCAAGATTGTGGTAACCAAGCTAAGAAAGATTGTCCTCACATGAGATGTAGAACTTGTTGTAAGAGTCGTGGCTTTCAGTGTCAAACTCATGTTAAAAGCACTTGGGTTCCTGCTTCTAGACGCCGTGAACGTCAACAACAATTATCTTCTTCTCCTTTACAAAGAGATATTTCTAAACGCCCTAGAGATGCTTCAAATGCTCTTGTTTCAACTCGTAATTTTCAAACAGGGTTAGAGGAAGCAAATTTTCCTGCTGTGGTAAGCTCACCAGCGGAGTTCAGGTGTGTAAGGGTTAGTTCAATTGATGATGCAGATGATAGGTATGCATATCAAACGGCTGTTAACATTGGAGGACATTTGTTCAAAGGAATTCTCTATGATTTTGGTCCAGAAAGTAGTACCAACAATAACAACAACAACAATAGTAATTATAATAGTAGTAATTACATGATTGGGGAGACTTCTGGTGGAGGCGGTGTTGGCGTTGCCCAACCGTTGAACCTAATCTCCAACTCTGATACCACTGTTGTTGCCTCTTCGGGCGCACTTGTTGATCCTTCTTCGTTGTATTCGGCTCCGATTAATGCCTTCATGACGGCTAGTGGTACGCAATTCTTCCCTCGCCCAAGATCTTGA 981 0.4271 MAGLFSLGGGGRGNQGEESQQQQGHIPPQETLFWYNKNDDVSSYRGNLELWNQHQQQQQQDDMHAARPFFPRDLYGLGVGPSRVSSDDHEHQSSSRSAAFTMAMRSSSSAEGISCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPASRRRERQQQLSSSPLQRDISKRPRDASNALVSTRNFQTGLEEANFPAVVSSPAEFRCVRVSSIDDADDRYAYQTAVNIGGHLFKGILYDFGPESSTNNNNNNNSNYNSSNYMIGETSGGGGVGVAQPLNLISNSDTTVVASSGALVDPSSLYSAPINAFMTASGTQFFPRPRS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02096 326 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 310 IPR007818 GO:0003700|GO:0006355
Mepo1g02096 326 Pfam Domain of unknown function (DUF702) 112 246 - -
Mepo1g02096 326 MobiDBLite consensus disorder prediction 153 181 - -
Mepo1g02096 326 MobiDBLite consensus disorder prediction 153 170 - -
Mepo1g02096 326 MobiDBLite consensus disorder prediction 13 29 - -
Mepo1g02096 326 MobiDBLite consensus disorder prediction 1 29 - -
Mepo1g02096 326 NCBIfam LRP1 C-terminal domain 198 245 IPR006511 -
Mepo1g02096 326 NCBIfam putative zinc finger domain, LRP1 type 114 156 IPR006510 -
Mepo1g02096 326 MobiDBLite consensus disorder prediction 78 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02096 Mepo-Chr1 21533222 21535600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02096 1 326 C2H2 Transcription Factor Family AT3G51060 43.782 4.20e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo1g02096 DUF702 2.2e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02096 - - gmx:100781981 355.14